Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq21 206 5e-51 seq20 123 5e-26 >seq21 Length=72700 Score = 206 bits (228), Expect = 5e-51 Identities = 182/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||||| |||| ||||||||||||||||||| ||| ||||||||| |||| ||||| | Sbjct 55254 GACAGTTTCAGGCGGGCAGTTTGACTGGGGCAGTCACCTCCCAAAAGGTAATGGAGGTGT 55195 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||||| | | ||||| |||| ||||| || | | |||| ||| ||| ||| | | | Sbjct 55194 ACAAAGGTTCTCTCAGGCTGGACGGAAATCAGCCATAGAGTGTAAAAGCATAAGAGAGCT 55135 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||||| || || ||| ||||| |||||||||||| ||| ||||||| |||||| Sbjct 55134 TGACTGCGAGACGGACATGTCAAGCAGAGACGAAAGTCGGTTTTAGTGATCCGACGGTGC 55075 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 ||| ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 55074 TGAGTGGAAAGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 55028 >seq20 Length=43614 Score = 123 bits (136), Expect = 5e-26 Identities = 158/216 (73%), Gaps = 5/216 (2%) Strand=Plus/Minus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC 186 ||||||||||||||||||||||||||||||||||||||||||| | | ||| || ||| Sbjct 13779 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGTGTGCGAAGGTAAACTC 13720 Query 187 AGCTTG---GATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACA 243 | || || |||||| | | | || | || || ||||| || ||||||||| | Sbjct 13719 A--ATGAAAGACGGAAACTTTCTGTAGAGCGTAATGGTAAAAGTTTGCCTGACTGCGAGA 13662 Query 244 CCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACG 303 || || ||||| |||||||||||| | || |||||| |||||| ||||| | Sbjct 13661 GTGACACCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCAAAAGTGCTGCGTGGAAAG 13602 Query 304 GCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | ||| ||| || |||| ||| || |||||| Sbjct 13601 ACTTTTGCTTAACGAATCAAAGATACGCTAGGGATA 13566 Score = 123 bits (136), Expect = 5e-26 Identities = 158/216 (73%), Gaps = 5/216 (2%) Strand=Plus/Plus Query 127 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTC 186 ||||||||||||||||||||||||||||||||||||||||||| | | ||| || ||| Sbjct 41663 GGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGTGTGCGAAGGTAAACTC 41722 Query 187 AGCTTG---GATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTTTGACTGCGACA 243 | || || |||||| | | | || | || || ||||| || ||||||||| | Sbjct 41723 A--ATGAAAGACGGAAACTTTCTGTAGAGCGTAATGGTAAAAGTTTGCCTGACTGCGAGA 41780 Query 244 CCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGCTGAATGGAACG 303 || || ||||| |||||||||||| | || |||||| |||||| ||||| | Sbjct 41781 GTGACACCTCGAGCAGAGACGAAAGTCGGCCATAGTGATCCAAAAGTGCTGCGTGGAAAG 41840 Query 304 GCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | | ||| ||| || |||| ||| || |||||| Sbjct 41841 ACTTTTGCTTAACGAATCAAAGATACGCTAGGGATA 41876 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982399793696