Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01001432.1 Length=344 Score E Sequences producing significant alignments: (Bits) Value seq21 188 1e-45 seq20 98.7 2e-18 >seq21 Length=72700 Score = 188 bits (208), Expect = 1e-45 Identities = 226/304 (74%), Gaps = 20/304 (7%) Strand=Plus/Plus Query 2 GCGTCGCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGG 61 |||||||| | |||| |||| |||||| | || || |||||||||||||||||||||| Sbjct 58802 GCGTCGCTCCGTCAGACTTTCGTCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAGG 58861 Query 62 AGTCTGGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATC 121 |||||||||||||||||||||||||| | || || || |||||||| || ||||| |||| Sbjct 58862 AGTCTGGGCCGTGTCTCAGTCCCAATTTAGCTGTCCATCCTCTCAGACCAGCTACTGATC 58921 Query 122 GTCGGCTTGGTGGGCTATTATC-TCACCAACTACCTAATCGGCCGCGAGCCCATCTTTCA 180 |||| |||||||||| ||| | | ||| | | ||||| | ||| || | ||| || Sbjct 58922 GTCGCCTTGGTGGGCCCTTACCAACCCCACCAAGGTAATCAGACGCAAGATCGTCTCTCG 58981 Query 181 GCGATAAATCTTTGGTCAAAGAATGATGCCATCCTCTGACATTATGCGGTATTAGCGTTC 240 |||| || ||||| | ||| | | || ||| ||||||||| | Sbjct 58982 GCGA-AATTCTTT---------------CACTCCACAG-CA-TATTGGGTATTAGCTCCC 59023 Query 241 GTTTCCAAACGTTATTCCACTCTGAAAGGCAGGTTGCTCACGTGTTACTCACCCGTCCGC 300 ||||||| | ||||| || | |||||| || || || ||||||| ||||||||| ||| Sbjct 59024 GTTTCCAGAAGTTATCCCCAACCGAAAGGTAGATT-CTTACGTGTTCCTCACCCGTTCGC 59082 Query 301 CACT 304 |||| Sbjct 59083 CACT 59086 >seq20 Length=43614 Score = 98.7 bits (108), Expect = 2e-18 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||| ||| ||| || || ||||||||||||| | |||| Sbjct 16392 GCTGGATCAGGCTTGCGCCCAGTGTCCAAGATTCCTCACTGCTGCCTCCATCAAGAGTTC 16451 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||| |||||||||| ||||| | || || || || || | |||| ||| Sbjct 16452 GGGCCGTCTCTCAGTCCCGATGTGATTGGTCGTCCGCTAAGACCAATGAAAGATCATCGA 16511 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 |||||| ||| ||| || |||||||| |||||| Sbjct 16512 CTTGGTAAGCTTTTACCTTACCAACTATCTAATC 16545 Score = 98.7 bits (108), Expect = 2e-18 Identities = 114/154 (74%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 7 GCTGCATCAGGGTTTCCCCCATTGTGCAATATCCCCCACTGCTGCCTCCCGTAGGAGTCT 66 |||| |||||| || | |||| ||| ||| || || ||||||||||||| | |||| Sbjct 39050 GCTGGATCAGGCTTGCGCCCAGTGTCCAAGATTCCTCACTGCTGCCTCCATCAAGAGTTC 38991 Query 67 GGGCCGTGTCTCAGTCCCAATGTGGCCGTTCAACCTCTCAGTCCGGCTACCGATCGTCGG 126 ||||||| |||||||||| ||||| | || || || || || | |||| ||| Sbjct 38990 GGGCCGTCTCTCAGTCCCGATGTGATTGGTCGTCCGCTAAGACCAATGAAAGATCATCGA 38931 Query 127 CTTGGTGGGCTATTATCTCACCAACTACCTAATC 160 |||||| ||| ||| || |||||||| |||||| Sbjct 38930 CTTGGTAAGCTTTTACCTTACCAACTATCTAATC 38897 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 998399790336