Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq21 168 2e-39 seq20 89.7 1e-15 >seq21 Length=72700 Score = 168 bits (186), Expect = 2e-39 Identities = 154/192 (80%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 207 CCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCA 266 ||||||||||||| | |||||| | ||| | |||| ||||||| || | ||||| || Sbjct 56228 CCACAGCTTCGGCAAAAAACTTA-GTTCCGGT-CATTTTCGGCGCAAAAACGCTTGATCA 56285 Query 267 GTGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTA 326 |||||||||||||||||| || |||||||||||||| | || ||||||||| ||||| Sbjct 56286 GTGAGCTATTACGCACTCCTTAGAGGATGGCTGCTTCTAGGCAAACCTCCTGATTGTCAC 56345 Query 327 CGCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGG 386 ||| | ||| |||||| ||||| ||| | ||||| |||||||||| || |||||| Sbjct 56346 TGCATTTTCACCTCCTTTGCCACTTAGTTTTTATTTAGGAGCCTTAGCTGGTGGTCTGGG 56405 Query 387 CTGTTTCCCTCT 398 |||||||||||| Sbjct 56406 CTGTTTCCCTCT 56417 >seq20 Length=43614 Score = 89.7 bits (98), Expect = 1e-15 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 229 AAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTC 288 |||||||| ||||||||| | || | ||| ||| ||||||||||||||| || || Sbjct 14669 AAGCCCCGATACATTATCAGTGCTTTAAAACTCGACTAGTGAGCTATTACGCTTTCATTA 14728 Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 || ||||||||||||||||||| ||||| | ||||| Sbjct 14729 TAGAATGGCTGCTTCCAAGCCAATCTCCTAGCTGTCT 14765 Score = 89.7 bits (98), Expect = 1e-15 Identities = 78/97 (80%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 229 AAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTC 288 |||||||| ||||||||| | || | ||| ||| ||||||||||||||| || || Sbjct 40773 AAGCCCCGATACATTATCAGTGCTTTAAAACTCGACTAGTGAGCTATTACGCTTTCATTA 40714 Query 289 AAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCT 325 || ||||||||||||||||||| ||||| | ||||| Sbjct 40713 TAGAATGGCTGCTTCCAAGCCAATCTCCTAGCTGTCT 40677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177599752704