Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq20 120 3e-25 seq21 116 3e-24 >seq20 Length=43614 Score = 120 bits (132), Expect = 3e-25 Identities = 118/151 (78%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| |||||||| |||| | | ||||| ||||||| |||| | || Sbjct 17041 TCGAGTTGCAGAGAACAATCCGAACTAAGGAA-ACTTTTTGGGATTTGCTCAATGTTGCC 17099 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || || | ||| | |||||||| ||||||| ||||| |||||||||||||| Sbjct 17100 ATGTTGCCTCCTTTTGTCATTCCCATTGTAGCACGTGTGTAGCCCAACCCATAAGGGCCA 17159 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCC 151 || |||||||||||||||| ||||||||||| Sbjct 17160 TGCGGACTTGACGTCATCCTCACCTTCCTCC 17190 Score = 120 bits (132), Expect = 3e-25 Identities = 118/151 (78%), Gaps = 1/151 (1%) Strand=Plus/Minus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| |||||||| |||| | | ||||| ||||||| |||| | || Sbjct 38401 TCGAGTTGCAGAGAACAATCCGAACTAAGGAA-ACTTTTTGGGATTTGCTCAATGTTGCC 38343 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 | || || | ||| | |||||||| ||||||| ||||| |||||||||||||| Sbjct 38342 ATGTTGCCTCCTTTTGTCATTCCCATTGTAGCACGTGTGTAGCCCAACCCATAAGGGCCA 38283 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCC 151 || |||||||||||||||| ||||||||||| Sbjct 38282 TGCGGACTTGACGTCATCCTCACCTTCCTCC 38252 >seq21 Length=72700 Score = 116 bits (128), Expect = 3e-24 Identities = 117/152 (77%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 1 TCGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCG 60 |||||||||||| ||||||||| ||| ||| | ||| || |||| || || |||| Sbjct 57906 TCGAGTTGCAGAGTACAATCCGAACTGAGATCGAGTTTATGAGATTGGCATACCTTCGCA 57965 Query 61 GGTTGGCGGCCCTCTGTATGTACCATTGTATGACGTGTGAAGCCCTACCCATAAGGGCCA 120 |||| ||| |||| ||| | ||||||||| ||||||| ||||| |||||| || Sbjct 57966 GGTTAGCGACCCTTTGTCTCGACCATTGTAGTACGTGTGTAGCCCAGGATGTAAGGGGCA 58025 Query 121 TGAGGACTTGACGTCATCCCCACCTTCCTCCG 152 || |||||||| |||||| |||||||||||| Sbjct 58026 TGCTGACTTGACATCATCCACACCTTCCTCCG 58057 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415999915370