Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq3 356 4e-96 >seq3 Length=741603 Score = 356 bits (394), Expect = 4e-96 Identities = 267/310 (86%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||| | |||||||||||| ||||| || ||||||| | |||||||| Sbjct 38336 GAACGAGACCTCAGCCTGCTAAATAGTACGGCCCTATTCTTAGGGTCGC-GACTTCTTAG 38278 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| || | ||| |||||||||||||||||||||||||||||||||||||| Sbjct 38277 AGGGACTATGTGCGTTTAGCACATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 38218 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| || ||||||| | || ||||||||| Sbjct 38217 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGACTCAACGAGCTTATAACCTTGGCC 38158 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||||||||||||| ||| || |||||| |||||||||| |||||||||||| Sbjct 38157 GAAAGGTCTGGGTAATCT--CCAAATTCCGTCGTGATGGGGATAGATTATTGCAATTATT 38100 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 38099 AATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 38040 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 38039 GCCCTTTGTA 38030 Score = 356 bits (394), Expect = 4e-96 Identities = 267/310 (86%), Gaps = 4/310 (1%) Strand=Plus/Plus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||| | |||||||||||| ||||| || ||||||| | |||||||| Sbjct 121504 GAACGAGACCTCAGCCTGCTAAATAGTACGGCCCTATTCTTAGGGTCGC-GACTTCTTAG 121562 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| || | ||| |||||||||||||||||||||||||||||||||||||| Sbjct 121563 AGGGACTATGTGCGTTTAGCACATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 121622 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| || ||||||| | || ||||||||| Sbjct 121623 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGACTCAACGAGCTTATAACCTTGGCC 121682 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||||||||||||| ||| || |||||| |||||||||| |||||||||||| Sbjct 121683 GAAAGGTCTGGGTAATCT--CCAAATTCCGTCGTGATGGGGATAGATTATTGCAATTATT 121740 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 121741 AATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 121800 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 121801 GCCCTTTGTA 121810 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947199801088