Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq21 154 5e-35 seq20 127 7e-27 >seq21 Length=72700 Score = 154 bits (170), Expect = 5e-35 Identities = 361/534 (68%), Gaps = 13/534 (2%) Strand=Plus/Minus Query 5 GTCCGAACAGGGCGACA-GTCGCTGGGTGTAGACCCGAAACCAAGTGATCTACCCATGGC 63 ||| ||| ||||| ||| ||| | | |||||||||| ||| |||||||| ||| | | Sbjct 56755 GTCTGAATAGGGCAACACGTCCCGTCTTCTAGACCCGAACCCAGGTGATCTAACCACGAC 56696 Query 64 CAGGATGAAGGTGCGGTAACACGCCCTGGAGGTCCGAACCCACTAATGTTGAAAAATTAG 123 ||| |||||| | ||| | ||| ||||||| |||||| || |||||||||||| Sbjct 56695 CAGAATGAAGCTTTGGTGATACGAAGTGGAGGTTCGAACCGACCGATGTTGAAAAATCGA 56636 Query 124 GGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAACAAACTTGGAAATAGCTGGTTCTCTCC 183 ||||||| | ||| ||||||||||| || || | |||||||| |||||||||||| | Sbjct 56635 CGGATGAGTTATGGTTAGGGGTGAAATGCCAATCGAACTTGGAGCTAGCTGGTTCTCCTC 56576 Query 184 GAAAACTATTTAGGTAGTGC-CTCAAGTATCACCAT--CGGGGGTAGAGCACTGTTATGG 240 |||| || ||| || | | ||| | | | |||||||| ||| ||||| || Sbjct 56575 GAAATGCGTTGAGGCGCAGCGGTATATTATGAACTTTCCGGGGGTAAAGCTCTGTTTAGG 56516 Query 241 CTAGGG-GGTCATTGCGACTTACCAAACCATTGCAAACTCCGAATGC--GCATCAGTTTT 297 ||| | | ||| |||||| | ||||||||| |||| | | | ||| Sbjct 56515 TGCGGGCTGCGAAAGCG--GTACCAATCTTTTGCAAACTAAGAATACCGGAAATGATTTC 56458 Query 298 ACCGCGGGAGTGAGGGCATGGGTGCTAAGGTCCGTGCCCGAGAGGAGAAGAATCCGGACT 357 | |||||| ||| | ||| | ||| | ||||| || | || ||| Sbjct 56457 AATCTACCAGTGAGACTGCGGGGGACAAGCTTCGTAGTCAAGAGGGAAACAGCCCAGACC 56398 Query 358 ATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTAACGAAGTCTGATTGCTAAGACA 417 | |||||||||| || |||| | | |||||| | || || || | ||| |||| Sbjct 56397 ACCAGCTAAGGCTCCTAAATAAAAACTAAGT--GGCAAAGGAGGTGAAAATGCAGTGACA 56340 Query 418 GCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAGAGTGCGTAACAGCTCACTAGTC 477 |||| ||| || | |||||||||| || | ||| |||||||||| |||||||| || Sbjct 56339 ATCAGGAGGTTTGCCTAGAAGCAGCCA-TCCTCTAAGGAGTGCGTAATAGCTCACTGATC 56281 Query 478 GAGGAGTCGGGCGTGGATAATAATCGGGTATTAAGTTGTCTACCGAAGCAGTGG 531 || | ||| || ||| | | || | |||||| | | ||||||| |||| Sbjct 56280 AAGCGTTTTTGCGCCGAAAATGA-CCGGAACTAAGTTTTTTGCCGAAGCTGTGG 56228 >seq20 Length=43614 Score = 127 bits (140), Expect = 7e-27 Identities = 307/453 (68%), Gaps = 15/453 (3%) Strand=Plus/Minus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||||| |||||||||| | || |||| ||||| ||||| | ||||| Sbjct 15143 GACCCGAAACTAAGTGATCTAGCTTTGAACAGGCTGAAGAAAGGGTAAAAGCTTTTGGAG 15084 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 | |||||| || ||||| || | | |||||| || || |||||||||||||| | Sbjct 15083 GGCCGAACTGACGTCTGTTGCAATAGACGCAGATGAGTTGAGGCTAGGGGTGAAAGGCCA 15024 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC-CTCAAGTATC 213 | ||||||| || ||||||||||||| ||||| |||| ||||| || |||| || Sbjct 15023 ATCAAACTTAGAGATAGCTGGTTCTCCGCGAAATTTATTGAGGTAAAGCGTTCAACGATG 14964 Query 214 ACCATCGGGGGTAGAGCACT-GTTATGGCTAGGGGGTCATTGCGACTTACCAAAC-CATT 271 | |||||||||||||| ||| | ||||| || | ||||| ||| ||| Sbjct 14963 TAGAAAGGGGGTAGAGCACTCATTAGGTAAAGGGGATC-CAAAGTCTTACTGAACTTATT 14905 Query 272 GCAAACTCCGAATGCGCATCAGTTTTACCGCG-GGAGTGAGGGCATGGGTGCTAAGGTCC 330 | |||||||||| | || | || | | | || || |||||||||| Sbjct 14904 G-AAACTCCGAAGACCTTTCTTTGATATCTTGAGCAGACAGACTTAAAGTGCTAAGGTTT 14846 Query 331 GTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCT---AAG 387 | | ||| || | || |||| | ||||||| || || ||| | ||| Sbjct 14845 TAAGTCAAAAGGGAAACAGCCCAGACTGTTCGCTAAGGTCCTTAA---ACATTTTGGAAG 14789 Query 388 TTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTC 447 | | || | || | | | ||||||||||||| ||||||||||||||||||||| Sbjct 14788 TGGTA--AAAGGCGTTTTAAAACAAAGACAGCTAGGAGATTGGCTTGGAAGCAGCCATTC 14731 Query 448 ATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | ||| || |||||| ||||||||||||||| Sbjct 14730 -TATAATGAAAGCGTAATAGCTCACTAGTCGAG 14699 Score = 127 bits (140), Expect = 7e-27 Identities = 307/453 (68%), Gaps = 15/453 (3%) Strand=Plus/Plus Query 35 GACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAG 94 |||||||||| |||||||||| | || |||| ||||| ||||| | ||||| Sbjct 40299 GACCCGAAACTAAGTGATCTAGCTTTGAACAGGCTGAAGAAAGGGTAAAAGCTTTTGGAG 40358 Query 95 GTCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTA 154 | |||||| || ||||| || | | |||||| || || |||||||||||||| | Sbjct 40359 GGCCGAACTGACGTCTGTTGCAATAGACGCAGATGAGTTGAGGCTAGGGGTGAAAGGCCA 40418 Query 155 AACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC-CTCAAGTATC 213 | ||||||| || ||||||||||||| ||||| |||| ||||| || |||| || Sbjct 40419 ATCAAACTTAGAGATAGCTGGTTCTCCGCGAAATTTATTGAGGTAAAGCGTTCAACGATG 40478 Query 214 ACCATCGGGGGTAGAGCACT-GTTATGGCTAGGGGGTCATTGCGACTTACCAAAC-CATT 271 | |||||||||||||| ||| | ||||| || | ||||| ||| ||| Sbjct 40479 TAGAAAGGGGGTAGAGCACTCATTAGGTAAAGGGGATC-CAAAGTCTTACTGAACTTATT 40537 Query 272 GCAAACTCCGAATGCGCATCAGTTTTACCGCG-GGAGTGAGGGCATGGGTGCTAAGGTCC 330 | |||||||||| | || | || | | | || || |||||||||| Sbjct 40538 G-AAACTCCGAAGACCTTTCTTTGATATCTTGAGCAGACAGACTTAAAGTGCTAAGGTTT 40596 Query 331 GTGCCCGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCT---AAG 387 | | ||| || | || |||| | ||||||| || || ||| | ||| Sbjct 40597 TAAGTCAAAAGGGAAACAGCCCAGACTGTTCGCTAAGGTCCTTAA---ACATTTTGGAAG 40653 Query 388 TTAAACTAACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTC 447 | | || | || | | | ||||||||||||| ||||||||||||||||||||| Sbjct 40654 TGGTA--AAAGGCGTTTTAAAACAAAGACAGCTAGGAGATTGGCTTGGAAGCAGCCATTC 40711 Query 448 ATTTAAAGAGTGCGTAACAGCTCACTAGTCGAG 480 | ||| || |||||| ||||||||||||||| Sbjct 40712 -TATAATGAAAGCGTAATAGCTCACTAGTCGAG 40743 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689599645184