Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq21 129 1e-27 seq20 80.6 5e-13 >seq21 Length=72700 Score = 129 bits (142), Expect = 1e-27 Identities = 174/241 (72%), Gaps = 10/241 (4%) Strand=Plus/Minus Query 5 CACATGGTGGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCT 64 || |||||||| || || || || ||||||||| ||| | | ||| | ||| Sbjct 57405 CATATGGTGGAGATCTAGGGACCTAGAGCCGATGAAGGGCGTGACAACCGACGAAATGCT 57346 Query 65 GCGGGGAGTGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCCGGCCCTT 124 |||||||| || | | || |||||||| ||||| |||||| ||| |||| Sbjct 57345 TCGGGGAGT-AGGACGTATACGTTGATCCGGAGATTCCCGAATAGGGCAACC-------- 57295 Query 125 TGGGTCATTGCATGCTGAATACATAGGTATGC-AAAGCGAACGCGGCGAACTGAAACATC 183 | |||| | | ||||| ||||| | | |||| ||| | | ||||||||||||| Sbjct 57294 TTAAACATTCCTTCTTGAATTCATAGAGAAGAGAAAGTCAACTCAGTGAACTGAAACATC 57235 Query 184 TAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGG 243 | |||||||| ||||||||||| ||| | |||||||||||||| ||||||||||||||| Sbjct 57234 TTAGTAGCTGAAGGAAAAGAAAGCAAAAGCGATTCCCAAAGTAGCGGCGAGCGAAATGGG 57175 Query 244 A 244 | Sbjct 57174 A 57174 >seq20 Length=43614 Score = 80.6 bits (88), Expect = 5e-13 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 || ||| ||||||||||||||| | ||||||||||||||||||||||||| ||||| Sbjct 15612 GGTGAATTGAAACATCTAAGTAACCCAAGGAAAAGAAATCAACCGAGATTCCGTAAGTAT 15553 Query 228 TGGCGAGCGAA-ATGG 242 |||||| ||| |||| Sbjct 15552 CGGCGAGAGAACATGG 15537 Score = 80.6 bits (88), Expect = 5e-13 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 168 GGCGAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAG 227 || ||| ||||||||||||||| | ||||||||||||||||||||||||| ||||| Sbjct 39830 GGTGAATTGAAACATCTAAGTAACCCAAGGAAAAGAAATCAACCGAGATTCCGTAAGTAT 39889 Query 228 TGGCGAGCGAA-ATGG 242 |||||| ||| |||| Sbjct 39890 CGGCGAGAGAACATGG 39905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918399807136