Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq3 666 0.0 >seq3 Length=741603 Score = 666 bits (738), Expect = 0.0 Identities = 467/529 (88%), Gaps = 10/529 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 34717 CTTTTATTCCACAAGAGATTTCTGTTCTCTTTGAGCTCATCTTAGGACACCTGCGTTATC 34776 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct 34777 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCTGGATC 34836 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || || || || |||| || | | || || ||| | |||| || Sbjct 34837 GTAT----AAATAC-TTGGGGCTAGAAGCAGGACCGG--AGTCCGCCTCCACCTCATGGA 34889 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||| |||| |||| ||||||||||||||| | ||||||| ||||||||||| Sbjct 34890 ATAAGTAAAATAACGTTAAGAGTAGTGGTATTTCACGTTCGCCGAA---GCTCCCACTTA 34946 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 34947 TTCTACACCTCCTAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 35006 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 35007 TTTCCCCGCCGTTTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 35066 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35067 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 35126 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 35127 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 35186 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 35187 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAAAGTGTCAACATC 35235 Score = 666 bits (738), Expect = 0.0 Identities = 467/529 (88%), Gaps = 10/529 (2%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 125123 CTTTTATTCCACAAGAGATTTCTGTTCTCTTTGAGCTCATCTTAGGACACCTGCGTTATC 125064 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct 125063 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCTGGATC 125004 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || || || || |||| || | | || || ||| | |||| || Sbjct 125003 GTAT----AAATAC-TTGGGGCTAGAAGCAGGACCGG--AGTCCGCCTCCACCTCATGGA 124951 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||| |||| |||| ||||||||||||||| | ||||||| ||||||||||| Sbjct 124950 ATAAGTAAAATAACGTTAAGAGTAGTGGTATTTCACGTTCGCCGAA---GCTCCCACTTA 124894 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 124893 TTCTACACCTCCTAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 124834 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 124833 TTTCCCCGCCGTTTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 124774 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 124773 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 124714 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 124713 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 124654 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 124653 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAAAGTGTCAACATC 124605 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635199656608