Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq21 165 2e-38 seq20 96.9 7e-18 >seq21 Length=72700 Score = 165 bits (182), Expect = 2e-38 Identities = 194/263 (74%), Gaps = 17/263 (6%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATACAAGCTCCCACACGT 60 |||||||||||| |||||||||||||||||||| | ||| ||| Sbjct 58698 GGCTGCTGGCACAGAGTTAGCCGATGCTTATTCCTCGAATAC---------------CGT 58742 Query 61 GGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGC 120 | |||| ||| | ||||||||||||||| ||| | |||||||||||||||| Sbjct 58743 C-ATTTTTTTCTTCTTCGAGAAAAGAAGTTTACAACCCGCTGG-CCTTCATCCTTCACGC 58800 Query 121 TACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAG 180 | | ||| ||||||| |||||||||| || ||||| |||||||||||||||||| Sbjct 58801 AGCGTCGCTCCGTCAGACTTTCGTCCATTGCGGAAAATTCCCCACTGCTGCCTCCCGTAG 58860 Query 181 GAGTTTGGACCGTGTCTCAGTTCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCAT 240 |||| ||| |||||||||||| ||||| | | | || |||||||||| | ||| || Sbjct 58861 GAGTCTGGGCCGTGTCTCAGTCCCAATTTAGCTGTCCATCCTCTCAGACCAGCTACTGAT 58920 Query 241 CGTAGGCTAGGTGGGCCGTTACC 263 ||| | || |||||||| ||||| Sbjct 58921 CGTCGCCTTGGTGGGCCCTTACC 58943 >seq20 Length=43614 Score = 96.9 bits (106), Expect = 7e-18 Identities = 154/216 (71%), Gaps = 9/216 (4%) Strand=Plus/Plus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATAC--AAG-CTCCCACA 57 |||||||||||| || || |||| |||| ||| | | | ||| ||| |||| | | Sbjct 16263 GGCTGCTGGCACAGAATTTGCCGGAGCTTCTTCTTT-GATTCATGTCAAAGTCTCCAAAA 16321 Query 58 C---GTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 ||| | ||||| || | || |||| ||||||||| || ||||||| || Sbjct 16322 AACGGTGTACCGTTTTTTTTCA--ATGAAAGGGTTTTACAATCAATATAACCTTCGTCAC 16379 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | | ||||| |||| || || ||| || |||| |||||||||||||||||| Sbjct 16380 CCACGCGATATAGCTGGATCAGGCTTGCGCCCAGTGTCCAAGATTCCTCACTGCTGCCTC 16439 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTG 210 | | ||||| || |||| ||||||| || ||||| Sbjct 16440 CATCAAGAGTTCGGGCCGTCTCTCAGTCCCGATGTG 16475 Score = 96.9 bits (106), Expect = 7e-18 Identities = 154/216 (71%), Gaps = 9/216 (4%) Strand=Plus/Minus Query 1 GGCTGCTGGCACGGAGTTAGCCGATGCTTATTCATAAGGTACATAC--AAG-CTCCCACA 57 |||||||||||| || || |||| |||| ||| | | | ||| ||| |||| | | Sbjct 39179 GGCTGCTGGCACAGAATTTGCCGGAGCTTCTTCTTT-GATTCATGTCAAAGTCTCCAAAA 39121 Query 58 C---GTGGAAGGTTTTATTCCCTTATAAAAGAAGTTTACAATCCGTAGAACCTTCATCCT 114 ||| | ||||| || | || |||| ||||||||| || ||||||| || Sbjct 39120 AACGGTGTACCGTTTTTTTTCA--ATGAAAGGGTTTTACAATCAATATAACCTTCGTCAC 39063 Query 115 TCACGCTACTTGGCTGGTTCAGACTCTCGTCCATTGACCAATATTCCTCACTGCTGCCTC 174 ||||| | | ||||| |||| || || ||| || |||| |||||||||||||||||| Sbjct 39062 CCACGCGATATAGCTGGATCAGGCTTGCGCCCAGTGTCCAAGATTCCTCACTGCTGCCTC 39003 Query 175 CCGTAGGAGTTTGGACCGTGTCTCAGTTCCAATGTG 210 | | ||||| || |||| ||||||| || ||||| Sbjct 39002 CATCAAGAGTTCGGGCCGTCTCTCAGTCCCGATGTG 38967 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068799775552