Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq3 590 2e-166 >seq3 Length=741603 Score = 590 bits (654), Expect = 2e-166 Identities = 435/504 (86%), Gaps = 12/504 (2%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||||| |||| ||| ||||| |||| |||||||||||||||||| Sbjct 39568 GTTCTCATTCCAATTACCAGACTTGAAAAAGCCCGGTATTGTTATTTATTGTCACTACCT 39627 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 39628 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 39687 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| Sbjct 39688 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 39747 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 39748 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGGAACATCGCCGGGA 39807 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||| ||||||||| ||| ||||||| |||| ||| || | || | | | | Sbjct 39808 CAAGCCCATGCGATCCGTAAAGTTATCATGATTCA--------CCGCAAAACGAGGTCGG 39859 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 | |||||||||||||||| |||||| ||||| ||| ||| ||| ||||||||||||| Sbjct 39860 TCTTTATCTAATAAATACGTCCCTTCAAAAGTC-GGGATTTACGCACGTATTAGCTCTAG 39918 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| |||||||||| ||||||| || | ||||||||| || |||||||||||| Sbjct 39919 AATTACTACGGTTATCCGAGTAGTAA-ACACCACCAAATAAACTATTGCTGATTTAATGA 39977 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 39978 GCCATTCGCAGTTTCACAGTAT--AACGCTTATACTTAGACATGCATGGCTTAATCTTTG 40035 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 40036 AGACAAGCATATGACTACTGGCAG 40059 Score = 590 bits (654), Expect = 2e-166 Identities = 435/504 (86%), Gaps = 12/504 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||||| |||| ||| ||||| |||| |||||||||||||||||| Sbjct 120272 GTTCTCATTCCAATTACCAGACTTGAAAAAGCCCGGTATTGTTATTTATTGTCACTACCT 120213 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 120212 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120153 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||||| Sbjct 120152 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTACCACCATGGTA 120093 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 120092 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGGAACATCGCCGGGA 120033 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 |||| ||||||||| ||| ||||||| |||| ||| || | || | | | | Sbjct 120032 CAAGCCCATGCGATCCGTAAAGTTATCATGATTCA--------CCGCAAAACGAGGTCGG 119981 Query 301 TTTTTATCTAATAAATACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGCTCTAG 360 | |||||||||||||||| |||||| ||||| ||| ||| ||| ||||||||||||| Sbjct 119980 TCTTTATCTAATAAATACGTCCCTTCAAAAGTC-GGGATTTACGCACGTATTAGCTCTAG 119922 Query 361 AATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGA 420 |||||| |||||||||| ||||||| || | ||||||||| || |||||||||||| Sbjct 119921 AATTACTACGGTTATCCGAGTAGTAA-ACACCACCAAATAAACTATTGCTGATTTAATGA 119863 Query 421 GCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTG 480 ||||||||||||||||| |||| | ||||||||||||||||||||||||||||||||| Sbjct 119862 GCCATTCGCAGTTTCACAGTAT--AACGCTTATACTTAGACATGCATGGCTTAATCTTTG 119805 Query 481 AGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||| Sbjct 119804 AGACAAGCATATGACTACTGGCAG 119781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510399682816