Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq1 165 6e-36 >seq1 Length=1352724 Score = 165 bits (182), Expect = 6e-36 Identities = 405/606 (67%), Gaps = 6/606 (1%) Strand=Plus/Plus Query 66089 ATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTAC 66148 || ||||||||||| ||||| || |||||| ||||| ||||||||| ||| ||||||| Sbjct 25620 ATCGTGCCCAAATTTTGTTGGTTCGACTTGCGGTTGCACGCATCCTTGAACAACATGTAC 25679 Query 66149 GGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGAGCGCGTGCCTTCACC 66208 || | || || || ||||| | |||| || || |||||| | || || | | Sbjct 25680 GGGTTACCAGTTTCCACTTGCGCTTCAAGAATCGCAAACCAAAGCTGCTGGGCGTTGATC 25739 Query 66209 GTACGTACCGCCCTACCTTTGCGTT-CGTAATGTTCGTAGAGGTGTTCGAAGGATTCACC 66267 || | | |||| ||| || |||| | ||| | ||| || |||||| Sbjct 25740 GT-CTTCTTACCCTTGTTTTCTTTTTCGTACTTGGTGTACAAAGCTTCAAACTCTTCACC 25798 Query 66268 CCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGACCAATCACCATCCTG 66327 ||| |||||||| || || |||| || || ||||| | || ||| | || | | Sbjct 25799 CCAGCATTCGGACAAACCCGGGCACTCGTTCGGGCACATTAACGTCCACTTGCCGTTTTC 25858 Query 66328 TTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCG 66387 ||| || | ||| || | ||| |||| | |||| || | || || |||| Sbjct 25859 TTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAACCGTAAAACAAGTCACGAGCTC- 25917 Query 66388 TTGCTCCT-CAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCC 66446 | ||| || | | ||||| || || ||||||||||| | || |||||||| | |||| Sbjct 25918 TCGCTTCTTCCTTCCCGTGGTTCTTTCGCAAGTCGAGCCAGTCGAAGATGTCAGAGTGCC 25977 Query 66447 ATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCACCTTGGTCGACGTAGC 66506 | ||||| ||||| ||||| || | |||| | || || ||||| |||||||| ||||| | Sbjct 25978 ACGGTTCGAGGTAAATGGCAAAAGCGCCCTTGCGCTTACCGCCGCCTTGGTCCACGTACC 26037 Query 66507 GAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAGATTTGCCATTGGTGC 66566 || | |||||| || || | |||||| | || ||||| || | || || |||| Sbjct 26038 TCGCCGTGTCGTTGAACACGCGAAGCATCGGAATGATACCGTTCGAGGTACCGTTTGTGC 26097 Query 66567 CGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGACCAATACCACCGGCC 66625 | ||| || | || || || || ||||||| | || ||||||||| ||||| Sbjct 26098 CTCTAATGTACGA-CGAAGTGGCGCGGATGTCGTGAATAGACAAACCAATACCGCCGGCG 26156 Query 66626 GTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCGTCAATGGAGTCACCC 66685 | ||| || ||| || || || || || | | || || ||||||||||| || Sbjct 26157 GACTTGGAAATGCACGCGCATTCCTTCAACGTGTCGTAGATACCTTCAATGGAGTCTTCC 26216 Query 66686 TTGATG 66691 || ||| Sbjct 26217 TTCATG 26222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397567898247440