Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20prasinos_20[genbank_20GCA_5F002220235.1_202012-11-22] 21 sequences; 15,074,320 total letters Query= NC_031906.1 Length=198190 Score E Sequences producing significant alignments: (Bits) Value seq21 807 0.0 >seq21 Length=72700 Score = 807 bits (894), Expect = 0.0 Identities = 774/987 (78%), Gaps = 6/987 (1%) Strand=Plus/Minus Query 188859 ATGGGTCACCTCTACTAACAACCGTCTGTATGTCGGTTGGTTCGGTGTCCTGATGATCCC 188918 |||| |||| || ||| | |||||| | || |||| ||||||||||| | |||||||| Sbjct 54058 ATGGATCACTTCAACTGAGAACCGTTTATACATCGGATGGTTCGGTGTATTAATGATCCC 53999 Query 188919 TACGCTTCTCGCTGCAACCATCTGC-TTCATCGTCGCCTTTGTCGCTGCACCCCCTGTAG 188977 ||| | | | || || |||| |||||||| || || |||| || || || || | Sbjct 53998 TACATTATTAACAGCTACT-TCTGTATTCATCGTAGCATTCATCGCAGCTCCTCCAGTGG 53940 Query 188978 ACATTGATGGCATCCGCGAACCCGTCGCTGGTTCACTCATGTATGGAAACAACATCATCT 189037 |||| ||||| || || || || || |||| ||||| ||||| |||||||||||||||| Sbjct 53939 ACATCGATGGTATTCGTGAGCCAGTATCTGGATCACTTATGTACGGAAACAACATCATCT 53880 Query 189038 CTGGTGCTGTTGTCCCTTCATCCAACGCAATTGGTCTTCACTTCTACCCCATCTGGGAAG 189097 |||||||||| || ||| |||| ||||| || || |||||||||||||| |||||||||| Sbjct 53879 CTGGTGCTGTAGTTCCTACATCAAACGCTATCGGACTTCACTTCTACCCAATCTGGGAAG 53820 Query 189098 CCGCCTCACTCGATGAGTGGCTCTACAACGGTGGTCCTTTCCAACTGGTAGTCTTCCACT 189157 | || |||| ||||||||||| ||||||||||| |||| ||| || | || | |||| Sbjct 53819 CAGCTACACTTGATGAGTGGCTTTACAACGGTGGACCTTACCAGCTTATCGTATGTCACT 53760 Query 189158 TCCTCATCGGCATCTACGCCTACATGGGTCGTGAGTGGGAACTCTCTTACCGTCTCGGTA 189217 || ||||||| | | | |||||||||||||||||||| || || | |||| | || | Sbjct 53759 TCTTCATCGGAGTATGTTCATACATGGGTCGTGAGTGGGAGCTTTCATTCCGTTTAGGAA 53700 Query 189218 TGCGTCCTTGGATCTGCATTGCTTACTCTGCACCTGTTGCAGCAGCATCCGCAGTCTTTC 189277 |||||||||||||| | ||||||||||| ||||| ||||| ||| | ||||| || Sbjct 53699 TGCGTCCTTGGATCGCTGTAGCTTACTCTGCTCCTGTAGCAGCTGCAACTGCAGTATTCA 53640 Query 189278 TGGTCTATCCTTTTGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGAA 189337 | | || || | || || || ||||||||||||| ||||| | ||||| ||||| Sbjct 53639 TCATTTACCCAATCGGACAGGGATCTTTCTCTGACGGTATGCCTCTTGGTATTTCTGGAA 53580 Query 189338 CCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACA 189397 | ||||||| |||| | || ||||| || |||||||||||||| |||||||| ||||||| Sbjct 53579 CTTTCAACTTCATGATCGTATTCCAGGCTGAGCACAACATCCTTATGCACCCATTCCACA 53520 Query 189398 TGCTGGGAGTCGCAGGTGTCTTCGGTGGTTCACTGTTCTCCGCAATGCATGGTTCACTCG 189457 |||| ||||| || ||||| |||||||||||||| ||||| || ||||| |||||||||| Sbjct 53519 TGCTTGGAGTAGCTGGTGTATTCGGTGGTTCACTTTTCTCTGCTATGCACGGTTCACTCG 53460 Query 189458 TTACCTCTTCACTGGTTCGTGAAACCACTGAAACCGAGTCCCAGAACTATGGTTACAAGT 189517 | || |||||||| | |||||||| ||||| | ||| || ||| || ||||||| Sbjct 53459 TAACTTCTTCACTTATCCGTGAAACTACTGAGAACGAATCAGCTAACGCAGGATACAAGT 53400 Query 189518 TTGGACAAGAAGAAGAAACGTACAACATCGTTGCTGCTCATGGATATTTCGGTCGTCTTA 189577 | |||||||||||||| || |||||||| || |||||||| || || ||||| ||||||| Sbjct 53399 TCGGACAAGAAGAAGAGACTTACAACATTGTAGCTGCTCACGGTTACTTCGGACGTCTTA 53340 Query 189578 TCTTCCAATATGCATCGTTCAACAACTCCCGTTCACTTCACTTCTTCCTCGCTGCCTGGC 189637 |||||||||| || || ||||||||||| |||||||| ||||||||||||||| ||||| Sbjct 53339 TCTTCCAATACGCTTCATTCAACAACTCACGTTCACTCCACTTCTTCCTCGCTATCTGGC 53280 Query 189638 CAGTCGTGGGTATCTGGTTTACCGCCCTCGGCGTCAGCACCATGGCATTCAACCTCAATG 189697 | || |||| |||||||| || || || || | || ||||| |||||||| || | Sbjct 53279 CTGTAATGGGAATCTGGTTCACAGCTCTTGGTATTTCTACTATGGCTTTCAACCTTAACG 53220 Query 189698 GGTTCAACTTCAATCAATCCATTCTTGATGGTCAA--GGTCGTGTTCTGAACACATGGGC 189755 | ||||||||||| || || | | ||| |||| || ||||| | ||||||||||| Sbjct 53219 GATTCAACTTCAACCAGTCAGTGGTAGAT--TCAAACGGACGTGTGATCAACACATGGGC 53162 Query 189756 AGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCATGAGCGTAACGCTCACAA 189815 || || | ||||||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct 53161 TGATATTGTAAACCGTGCTAACCTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 53102 Query 189816 CTTCCCTCTTGATCTGGCAGCAGCAGA 189842 |||||| ||||| || ||| | | ||| Sbjct 53101 CTTCCCACTTGACCTCGCATCTGTAGA 53075 Score = 572 bits (634), Expect = 2e-158 Identities = 743/1019 (73%), Gaps = 6/1019 (1%) Strand=Plus/Minus Query 189984 TGGTTTGACATCCTTGATGACTGGCTTAAACGAGATCGCTTTGTCTTTGTGGGTTGGTCT 190043 ||||| |||| | | |||||||||||||| || || || || || || || ||||||||| Sbjct 62485 TGGTTCGACAACGTAGATGACTGGCTTAAGCGTGACCGTTTCGTATTCGTAGGTTGGTCT 62426 Query 190044 GGATTACTTCTTTTTCCCAC-TGCTTATCTCGCAATTGGTGGCTGGCTTACTGGCACGAC 190102 ||| | || || |||||| ||| || | ||| ||||||| ||||||||||| || || Sbjct 62425 GGACTT-TTATTATTCCCATGTGCATACTTTGCACTTGGTGGATGGCTTACTGGAACAAC 62367 Query 190103 GTTTGCTACAAGCTGGTACACCCACGGACTCGCAAGTAGTTACCTTGA-GGGTGCTAATT 190161 || | || |||||||| ||||| | |||||| |||||||| ||||| ||| | Sbjct 62366 ATTCGTAACTTCATGGTACACACACGGTTTAGCAAGTTCATACCTTGAAGGGTG-TAACT 62308 Query 190162 TTCTTACAGCGGCTGTGTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTTCTACTTT 190221 | || || | || || |||||||| | | || |||| || || |||||||| |||| Sbjct 62307 TCCTCACTTCAGCAGTATCAACGCCATCAAACGCGATGGCACACTCACTTCTTCTCCTTT 62248 Query 190222 GGGGTCCTGAATCTCAAGGCGATTTCGTCAGGTGGATCCAACTTGGGGGACTCTGGGCTT 190281 |||| || ||| | ||||| || ||| | ||| |||||||| ||| | ||| | | Sbjct 62247 GGGGACCAGAAGCACAAGGTGACTTCACACGTTGGTGTCAACTTGGTGGATTATGGACAT 62188 Query 190282 TTGTGGCGCTCCACGGGGCTTTCGCTCTAATTGGATTCATGCTTCGTCAGTTTGAACTGG 190341 | || || || ||||| || || | |||| ||||| ||||||||||| |||||| | | Sbjct 62187 TCGTAGCTCTTCACGGAGCATTTGGATTAATCGGATTTATGCTTCGTCAATTTGAAATTG 62128 Query 190342 CACGTCTCATCGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATCGCTGTTT 190401 | ||| | || ||||| ||||| || ||||| ||||| | || || ||||| | Sbjct 62127 CTCGTGCAGTACAAATTCGTCCATACAACGCGATTGCATTCTCAGCACCAATTGCTGTGT 62068 Query 190402 TTGTTAGCGTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTCTTCGCGCCATCCT 190461 |||| || || || || ||||| || || ||||| |||||||||| || ||||| | Sbjct 62067 TTGTATCTGTATTCCTTATTTACCCACTTGGGCAATCAGGTTGGTTCTTTGCACCATCAT 62008 Query 190462 TCGGTGTGGCAGCGATCTTCCGCTTCCTCCTCTTCTTGCAGGGCTTCCATAACTGGACGC 190521 | ||||| || | || ||||| || | || ||||| || || ||||| |||||||| | Sbjct 62007 TTGGTGTAGCTGGAATTTTCCGTTTTATTCTTTTCTTCCAAGGTTTCCACAACTGGACAC 61948 Query 190522 TGAACCCCTTCCACATGATGGGTGTTGCAGGTATCCTGGGAGGAGCACTACTGTCAGCAA 190581 | ||||| |||||||||||||| || || ||| | || || | |||||| || | |||| Sbjct 61947 TTAACCCATTCCACATGATGGGAGTAGCTGGTGTACTCGGTGCAGCACTTCTTTGTGCAA 61888 Query 190582 TCCATGGTGTGACTGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACGTTTA 190641 | || || | ||||||||||| || | | ||||||||||| ||||||| || Sbjct 61887 TTCACGGAGCAACTGTAGAGAACACACTTTTCGAAGATGGTGATGGTTCAAACACATTCC 61828 Query 190642 AAGCATTCGACTCTACACAAGAGGAAGAGACCTATTCGATGGTCACTGCCAACCGTTTCT 190701 |||||| || | || |||| |||||||| || || ||||| || || |||||||||| Sbjct 61827 GTGCATTCAACCCAACTCAAGCAGAAGAGACTTACTCAATGGTAACGGCTAACCGTTTCT 61768 Query 190702 GGTCTCAAATCTTTGGTGTTGCGTTCAGTAATAAGAGGTGGTTGCATTTCTTTATGCTCT 190761 |||| || || || ||||| || ||| || ||| | ||| | || ||||| ||||||| Sbjct 61767 GGTCACAGATTTTCGGTGTAGCTTTCTCAAACAAGCGTTGGCTTCACTTCTTCATGCTCT 61708 Query 190762 TTGTTCCTGTTA-TGGGTCTGTGGACTTCTTCCATCGGTATTATTGGTCTTGCTCTCAAC 190820 | || ||||||| ||||| | |||| || | | || | | || | || || ||| Sbjct 61707 TCGTACCTGTTACTGGGT-TATGGATGTCAGCACTTGGAGTAGTAGGATTAGCACTTAAC 61649 Query 190821 CTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAGAAGATCCAGAGTTCGAG 190880 || ||||| || ||||| ||||| ||||||||| | || ||||||||||| |||||||| Sbjct 61648 CTCCGTGCATACGACTTCGTATCACAAGAGATCCGTGCTGCAGAAGATCCTGAGTTCGAA 61589 Query 190881 ACTTTTTACACAAAAAATATACTTTTGAATGAAGGTCTTCGTTCATGGTTGGCACCTGTT 190940 || || ||||| || || || ||| | || ||||| | ||| ||||| ||||| || Sbjct 61588 ACATTCTACACGAAGAACATTCTTCTTAACGAAGGAATCCGTGCATGGATGGCAGCTCAA 61529 Query 190941 GATCAACCCCATGAGAATTTTGTATTTCCAGAAGAAGTATTGCCAAGAGGCAACGCTCT 190999 ||||| || ||||| || ||||||| || || || ||| | ||| | || |||||||| Sbjct 61528 GATCAGCCTCATGAAAACCTTGTATTCCCTGAGGAGGTACTTCCACGTGGAAACGCTCT 61470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 634079833554000