Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq348 304 2e-80 seq16 304 2e-80 >seq348 Length=7419 Score = 304 bits (336), Expect = 2e-80 Identities = 224/256 (88%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 4563 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 4620 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||| || ||||||||| ||||||||||||||||| | ||||| | ||||| Sbjct 4621 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGACGGAATTTGGA-GATTA 4679 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||||| ||||||||||| ||| |||||||| | | |||||||||||||||||||| Sbjct 4680 CCCAGACCTTTCGGCCAAGGTTATAAGCTCGTTGAGTCCGTCAGTGTAGCGCGCGTGCGG 4739 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | Sbjct 4740 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATGTGCTAAACG 4799 Query 241 GCCAT-CTCCCTCGAA 255 ||| |||||| || Sbjct 4800 CACATAGTCCCTCTAA 4815 >seq16 Length=50947 Score = 304 bits (336), Expect = 2e-80 Identities = 224/256 (88%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||||||||||||| ||||||| |||| ||||||| |||||||||||| ||| | Sbjct 4563 GTACAAAGGGCAGGGACGTAATCAACGCAAGCT-GATGACTTGCGCTTACTAGGCATT-C 4620 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120 ||||||||||| || ||||||||| ||||||||||||||||| | ||||| | ||||| Sbjct 4621 CTCGTTGAAGATTAATAATTGCAATAATCTATCCCCATCACGACGGAATTTGGA-GATTA 4679 Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180 ||| ||||| ||||||||||| ||| |||||||| | | |||||||||||||||||||| Sbjct 4680 CCCAGACCTTTCGGCCAAGGTTATAAGCTCGTTGAGTCCGTCAGTGTAGCGCGCGTGCGG 4739 Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240 |||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | Sbjct 4740 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATGTGCTAAACG 4799 Query 241 GCCAT-CTCCCTCGAA 255 ||| |||||| || Sbjct 4800 CACATAGTCCCTCTAA 4815 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751984570370