Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq348 113 3e-23 seq16 113 3e-23 >seq348 Length=7419 Score = 113 bits (124), Expect = 3e-23 Identities = 97/118 (82%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA-AATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||| | ||||| ||| ||||||| | Sbjct 5089 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGTGAAGTCATCAAT--TAACATCCAC 5146 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||| ||||| |||| |||||| || ||||||| ||| ||||||| Sbjct 5147 CAATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGATGGTATCTAATCATCTTCGA 5204 >seq16 Length=50947 Score = 113 bits (124), Expect = 3e-23 Identities = 97/118 (82%), Gaps = 3/118 (3%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAA-AATGATAACATCGCC 59 ||||||||| ||||||||||||| |||||||| | ||||| ||| ||||||| | Sbjct 5089 GAACCCAAAAACTTTGATTTCTCATAAGGTGCTGGTGAAGTCATCAAT--TAACATCCAC 5146 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 | ||||||||||||||| ||||| |||| |||||| || ||||||| ||| ||||||| Sbjct 5147 CAATCCCTAGTCGGCATCGTTTATGGTTGAGACTAGGATGGTATCTAATCATCTTCGA 5204 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278394472020