Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq348 241 2e-61 seq16 241 2e-61 >seq348 Length=7419 Score = 241 bits (266), Expect = 2e-61 Identities = 202/244 (83%), Gaps = 3/244 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||||||||||||||||||||||||||||| ||| | ||| ||||| |||||||||||| Sbjct 5446 TTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTACGCTTGAATATATTAGCATGGAA 5387 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| | ||||||| | | || |||| | |||||| || ||| | ||||||||||| Sbjct 5386 TAACACTATAGGAC-TCCTGTCCTATCTCGTTGGTCTCG-GGATGGGAGTAATGATTAAG 5329 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||| | ||| ||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct 5328 AGGAACAGTTGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAA 5269 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| |||| |||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 5268 GACGAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTG 5210 Query 315 GGGG 318 |||| Sbjct 5209 GGGG 5206 >seq16 Length=50947 Score = 241 bits (266), Expect = 2e-61 Identities = 202/244 (83%), Gaps = 3/244 (1%) Strand=Plus/Minus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTCGAATACATTAGCATGGAA 134 |||||||||||||||||||||||||||||| ||| | ||| ||||| |||||||||||| Sbjct 5446 TTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTACGCTTGAATATATTAGCATGGAA 5387 Query 135 TAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAAT 194 ||| | ||||||| | | || |||| | |||||| || ||| | ||||||||||| Sbjct 5386 TAACACTATAGGAC-TCCTGTCCTATCTCGTTGGTCTCG-GGATGGGAGTAATGATTAAG 5329 Query 195 AGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAA 254 ||| | ||| ||||| | ||||| ||||||||||||||||||||||||||||| || Sbjct 5328 AGGAACAGTTGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTATGAAA 5269 Query 255 GACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTTA 314 ||| |||| |||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 5268 GACGAACTTCTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTTG 5210 Query 315 GGGG 318 |||| Sbjct 5209 GGGG 5206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915180616064