Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016-
12-02] 2,118 sequences; 10,057,911 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq348 201 5e-49
seq16 201 5e-49
>seq348
Length=7419
Score = 201 bits (222), Expect = 5e-49
Identities = 222/297 (75%), Gaps = 19/297 (6%)
Strand=Plus/Minus
Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446
||||| || |||| | | ||||||| | |||||||||||||||||||||||| | ||
Sbjct 3238 TGGCGGAAAGGTTTGCATTGACCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 3179
Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506
||||| |||||||||||||| | | || |||| |||||
Sbjct 3178 CGAGTCGGTGGGTGTCAAACCCACGAGG--------------CGCAGGT---AACCCA-- 3138
Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566
| | || |||||||| | | |||| | | || | ||||||| ||||||| ||
Sbjct 3137 ACTGAACAACATCGACCAACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 3078
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||
Sbjct 3077 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCGGAGGAAACTCCGGTG 3018
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||| ||| | ||| ||||||||||| | |||| | ||||||||||||||||
Sbjct 3017 GAGGCTCGAAGCAATACTGACGTGCAAATCGTTTGTCAGACTTGGGTATAGGGGCGA 2961
Score = 197 bits (218), Expect = 6e-48
Identities = 148/174 (85%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| |||||| |||||||||||||||||| |||| || |||||||| | ||||| ||
Sbjct 3513 TCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCAGGTGGTAAATTCCATCTAAGGC 3454
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||
Sbjct 3453 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGACCTT 3394
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208
|| |||||||||||||||| || |||||||||||| |||||||| || ||||
Sbjct 3393 TGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTCAAACC 3340
>seq16
Length=50947
Score = 201 bits (222), Expect = 5e-49
Identities = 222/297 (75%), Gaps = 19/297 (6%)
Strand=Plus/Minus
Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446
||||| || |||| | | ||||||| | |||||||||||||||||||||||| | ||
Sbjct 3238 TGGCGGAAAGGTTTGCATTGACCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 3179
Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506
||||| |||||||||||||| | | || |||| |||||
Sbjct 3178 CGAGTCGGTGGGTGTCAAACCCACGAGG--------------CGCAGGT---AACCCA-- 3138
Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566
| | || |||||||| | | |||| | | || | ||||||| ||||||| ||
Sbjct 3137 ACTGAACAACATCGACCAACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 3078
Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626
||||||||||||||||||||||||||||||| |||| |||||| |||||||||| ||||
Sbjct 3077 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCGGAGGAAACTCCGGTG 3018
Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||||| ||| | ||| ||||||||||| | |||| | ||||||||||||||||
Sbjct 3017 GAGGCTCGAAGCAATACTGACGTGCAAATCGTTTGTCAGACTTGGGTATAGGGGCGA 2961
Score = 197 bits (218), Expect = 6e-48
Identities = 148/174 (85%), Gaps = 0/174 (0%)
Strand=Plus/Minus
Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94
|||| |||||| |||||||||||||||||| |||| || |||||||| | ||||| ||
Sbjct 3513 TCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCAGGTGGTAAATTCCATCTAAGGC 3454
Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| |||
Sbjct 3453 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGACCTT 3394
Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208
|| |||||||||||||||| || |||||||||||| |||||||| || ||||
Sbjct 3393 TGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTCAAACC 3340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079954568900
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |