Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq348 201 5e-49 seq16 201 5e-49 >seq348 Length=7419 Score = 201 bits (222), Expect = 5e-49 Identities = 222/297 (75%), Gaps = 19/297 (6%) Strand=Plus/Minus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| || |||| | | ||||||| | |||||||||||||||||||||||| | || Sbjct 3238 TGGCGGAAAGGTTTGCATTGACCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 3179 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| |||||||||||||| | | || |||| ||||| Sbjct 3178 CGAGTCGGTGGGTGTCAAACCCACGAGG--------------CGCAGGT---AACCCA-- 3138 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 | | || |||||||| | | |||| | | || | ||||||| ||||||| || Sbjct 3137 ACTGAACAACATCGACCAACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 3078 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct 3077 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCGGAGGAAACTCCGGTG 3018 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| ||| | ||| ||||||||||| | |||| | |||||||||||||||| Sbjct 3017 GAGGCTCGAAGCAATACTGACGTGCAAATCGTTTGTCAGACTTGGGTATAGGGGCGA 2961 Score = 197 bits (218), Expect = 6e-48 Identities = 148/174 (85%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| |||||| |||||||||||||||||| |||| || |||||||| | ||||| || Sbjct 3513 TCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCAGGTGGTAAATTCCATCTAAGGC 3454 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 3453 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGACCTT 3394 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 || |||||||||||||||| || |||||||||||| |||||||| || |||| Sbjct 3393 TGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTCAAACC 3340 >seq16 Length=50947 Score = 201 bits (222), Expect = 5e-49 Identities = 222/297 (75%), Gaps = 19/297 (6%) Strand=Plus/Minus Query 387 TGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATG 446 ||||| || |||| | | ||||||| | |||||||||||||||||||||||| | || Sbjct 3238 TGGCGGAAAGGTTTGCATTGACCCGTCTAGAAACACGGACCAAGGAGTCTAACATGTGTG 3179 Query 447 CGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCGTG 506 ||||| |||||||||||||| | | || |||| ||||| Sbjct 3178 CGAGTCGGTGGGTGTCAAACCCACGAGG--------------CGCAGGT---AACCCA-- 3138 Query 507 AGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGT 566 | | || |||||||| | | |||| | | || | ||||||| ||||||| || Sbjct 3137 ACTGAACAACATCGACCAACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATACATGC 3078 Query 567 TGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTG 626 ||||||||||||||||||||||||||||||| |||| |||||| |||||||||| |||| Sbjct 3077 TGGGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCGGAGGAAACTCCGGTG 3018 Query 627 GAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||| ||| | ||| ||||||||||| | |||| | |||||||||||||||| Sbjct 3017 GAGGCTCGAAGCAATACTGACGTGCAAATCGTTTGTCAGACTTGGGTATAGGGGCGA 2961 Score = 197 bits (218), Expect = 6e-48 Identities = 148/174 (85%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 35 TCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGC 94 |||| |||||| |||||||||||||||||| |||| || |||||||| | ||||| || Sbjct 3513 TCGAGGAGTCGGGTTGTTTGGGAATGCAGCCCTAAGCAGGTGGTAAATTCCATCTAAGGC 3454 Query 95 TAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154 ||||||||||| |||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 3453 TAAATATTGGCGAGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGACCTT 3394 Query 155 TGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACC 208 || |||||||||||||||| || |||||||||||| |||||||| || |||| Sbjct 3393 TGAAAAGAGAGTTAAAAAGTACCTGAAATTGTTGAGGGGGAAGCGATTCAAACC 3340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079954568900