Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016-
12-02] 2,118 sequences; 10,057,911 total letters
Query= AAMG01000811.1
Length=502
Score E
Sequences producing significant alignments: (Bits) Value
seq1271 300 5e-79
>seq1271
Length=896
Score = 300 bits (332), Expect = 5e-79
Identities = 365/493 (74%), Gaps = 31/493 (6%)
Strand=Plus/Plus
Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60
|||| |||||||| | |||| ||||||||||||||||| | |||||||||||||||||
Sbjct 395 TACGGCCGCAAGGCTAAAACCCAAAGGAATTGACGGGGGCTTACACAAGCGGTGGAGCAT 454
Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120
||||||||||||||| ||||||| | ||||||||||| |||||||| |||
Sbjct 455 GTGGTTTAATTCGAAACAACGCGCAAAACCTTACCAATCCTTGACATA---TGA------ 505
Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTG-ACAGGTGATGCATGGTTGTCGTCA 179
| | |||| || | | | | | ||||||| ||||||| ||||||||
Sbjct 506 -AAAACCAGAGTGTTTACTTGCTCTGTTTCTTTTATACAGGTGCTGCATGGCTGTCGTCA 564
Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239
| ||||| ||||| |||||||||||||||| ||||| ||||||||| ||| |
Sbjct 565 GTTCGTGGTGTGAGCTGTTGGGTTAAGTCCCAGAACGAACGCAACCCTC---CTTTGAA- 620
Query 240 CCATCATTAAGTTGGGCAC-----TCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGT 294
|| ||| || | | || ||| |||||| || | ||||||||||
Sbjct 621 -----ATGAAG--GGTCTCCTTTTTCAAAG---ACTGCCAAGGATATCTTGGAGGAAGGT 670
Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354
| |||||||||||| || |||| |||||||| |||||||||||||||||||||||||
Sbjct 671 GAGGACGACGTCAAGTCCGCATGGCCCTTATGGGTTGGGCTACACACGTGCTACAATGGG 730
Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414
| ||||| || || | | || | | |||||| || | |||||| || |||||
Sbjct 731 AATGACAAAAGGAGGCAACATGGCAACATTGAGCAAACCCAAAAAAGTTCC-CTGAGTTC 789
Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474
||||||| |||||||||||| | |||||| ||||||||| ||||||||||||||||||
Sbjct 790 GGATTGTTCTCTGCAACTCGAGAACATGAAGTTGGAATCGCAAGTAATCGTAGATCAGCA 849
Query 475 TGCTACGGTGAAT 487
||||||||||||
Sbjct 850 CGCTACGGTGAAT 862
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1503968145280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |