Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq1271 300 5e-79 >seq1271 Length=896 Score = 300 bits (332), Expect = 5e-79 Identities = 365/493 (74%), Gaps = 31/493 (6%) Strand=Plus/Plus Query 1 TACGACCGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCAT 60 |||| |||||||| | |||| ||||||||||||||||| | ||||||||||||||||| Sbjct 395 TACGGCCGCAAGGCTAAAACCCAAAGGAATTGACGGGGGCTTACACAAGCGGTGGAGCAT 454 Query 61 GTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATCCTCTGACCCCTC 120 ||||||||||||||| ||||||| | ||||||||||| |||||||| ||| Sbjct 455 GTGGTTTAATTCGAAACAACGCGCAAAACCTTACCAATCCTTGACATA---TGA------ 505 Query 121 TAGAGATAGAGGTTTCCCCTTCGGGGGACAGAGTG-ACAGGTGATGCATGGTTGTCGTCA 179 | | |||| || | | | | | ||||||| ||||||| |||||||| Sbjct 506 -AAAACCAGAGTGTTTACTTGCTCTGTTTCTTTTATACAGGTGCTGCATGGCTGTCGTCA 564 Query 180 GCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTG 239 | ||||| ||||| |||||||||||||||| ||||| ||||||||| ||| | Sbjct 565 GTTCGTGGTGTGAGCTGTTGGGTTAAGTCCCAGAACGAACGCAACCCTC---CTTTGAA- 620 Query 240 CCATCATTAAGTTGGGCAC-----TCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGT 294 || ||| || | | || ||| |||||| || | |||||||||| Sbjct 621 -----ATGAAG--GGTCTCCTTTTTCAAAG---ACTGCCAAGGATATCTTGGAGGAAGGT 670 Query 295 GGGGACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGA 354 | |||||||||||| || |||| |||||||| ||||||||||||||||||||||||| Sbjct 671 GAGGACGACGTCAAGTCCGCATGGCCCTTATGGGTTGGGCTACACACGTGCTACAATGGG 730 Query 355 CAATACAAAGGGCAGCGAAACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTTC 414 | ||||| || || | | || | | |||||| || | |||||| || ||||| Sbjct 731 AATGACAAAAGGAGGCAACATGGCAACATTGAGCAAACCCAAAAAAGTTCC-CTGAGTTC 789 Query 415 GGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGCA 474 ||||||| |||||||||||| | |||||| ||||||||| |||||||||||||||||| Sbjct 790 GGATTGTTCTCTGCAACTCGAGAACATGAAGTTGGAATCGCAAGTAATCGTAGATCAGCA 849 Query 475 TGCTACGGTGAAT 487 |||||||||||| Sbjct 850 CGCTACGGTGAAT 862 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503968145280