Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016-
12-02] 2,118 sequences; 10,057,911 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq348 331 1e-88
seq16 331 1e-88
>seq348
Length=7419
Score = 331 bits (366), Expect = 1e-88
Identities = 230/258 (89%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4707 CTCGTTGAGTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 4766
Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122
||||||||||||||||||||||| ||| | || ||||||||||||||||| | || |
Sbjct 4767 CTGTTATTGCCTCAAACTTCCATGTGCTAAACGCACATAGTCCCTCTAAGAAGTC-GCGA 4825
Query 123 CC--AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| || |||| | | |||||||||||| | ||||||||||||||| ||||||||
Sbjct 4826 CCCTAAGAATAG--GGCCGTACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 4883
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4884 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 4943
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 4944 AAGAGCTCTCAATCTGTC 4961
>seq16
Length=50947
Score = 331 bits (366), Expect = 1e-88
Identities = 230/258 (89%), Gaps = 5/258 (2%)
Strand=Plus/Plus
Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62
|||| || |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4707 CTCGTTGAGTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 4766
Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122
||||||||||||||||||||||| ||| | || ||||||||||||||||| | || |
Sbjct 4767 CTGTTATTGCCTCAAACTTCCATGTGCTAAACGCACATAGTCCCTCTAAGAAGTC-GCGA 4825
Query 123 CC--AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180
|| || |||| | | |||||||||||| | ||||||||||||||| ||||||||
Sbjct 4826 CCCTAAGAATAG--GGCCGTACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 4883
Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 4884 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 4943
Query 241 AAGAGCTATCAATCTGTC 258
||||||| ||||||||||
Sbjct 4944 AAGAGCTCTCAATCTGTC 4961
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796783651158
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |