Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq348 331 1e-88 seq16 331 1e-88 >seq348 Length=7419 Score = 331 bits (366), Expect = 1e-88 Identities = 230/258 (89%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4707 CTCGTTGAGTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 4766 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| ||| | || ||||||||||||||||| | || | Sbjct 4767 CTGTTATTGCCTCAAACTTCCATGTGCTAAACGCACATAGTCCCTCTAAGAAGTC-GCGA 4825 Query 123 CC--AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || |||| | | |||||||||||| | ||||||||||||||| |||||||| Sbjct 4826 CCCTAAGAATAG--GGCCGTACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 4883 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4884 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 4943 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 4944 AAGAGCTCTCAATCTGTC 4961 >seq16 Length=50947 Score = 331 bits (366), Expect = 1e-88 Identities = 230/258 (89%), Gaps = 5/258 (2%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4707 CTCGTTGAGTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 4766 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||||||||||||||||||| ||| | || ||||||||||||||||| | || | Sbjct 4767 CTGTTATTGCCTCAAACTTCCATGTGCTAAACGCACATAGTCCCTCTAAGAAGTC-GCGA 4825 Query 123 CC--AACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTA 180 || || |||| | | |||||||||||| | ||||||||||||||| |||||||| Sbjct 4826 CCCTAAGAATAG--GGCCGTACTATTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTA 4883 Query 181 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 240 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4884 ACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGA 4943 Query 241 AAGAGCTATCAATCTGTC 258 ||||||| |||||||||| Sbjct 4944 AAGAGCTCTCAATCTGTC 4961 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796783651158