Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq348 293 4e-77 seq16 293 4e-77 >seq348 Length=7419 Score = 293 bits (324), Expect = 4e-77 Identities = 190/207 (92%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 12 ATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAA 71 ||||| |||| || || || | |||||||||||||||||||||||| |||||||||| Sbjct 481 ATTACTCTTGGAGC-ACAACCAACGGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAA 539 Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||| Sbjct 540 ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCTACACTTGGCGAATTCTGCTTCG 599 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 659 Query 192 TGCCACAAGCCAGTTATCCCTGTGGTA 218 ||||||||||||||||||||||||||| Sbjct 660 TGCCACAAGCCAGTTATCCCTGTGGTA 686 Score = 84.2 bits (92), Expect = 4e-14 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275 |||||||||||| |||||||||| ||||||| ||| ||||||||||||||||||| Sbjct 1119 GTAACTTTTCTGACACCTCTAGCGTCAAATTCCGACAAGCTAAAGGATCGATAGGCCATG 1178 Query 276 CTTTCATGGTTTGT 289 |||||| |||||| Sbjct 1179 CTTTCACAGTTTGT 1192 >seq16 Length=50947 Score = 293 bits (324), Expect = 4e-77 Identities = 190/207 (92%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 12 ATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAA 71 ||||| |||| || || || | |||||||||||||||||||||||| |||||||||| Sbjct 481 ATTACTCTTGGAGC-ACAACCAACGGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAA 539 Query 72 ACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCG 131 ||||||||||||||||||||| ||||||||||||||| || ||| |||||||||||||| Sbjct 540 ACCCAGCTCACGTTCCCTATTGGTGGGTGAACAATCCTACACTTGGCGAATTCTGCTTCG 599 Query 132 GTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 600 CAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 659 Query 192 TGCCACAAGCCAGTTATCCCTGTGGTA 218 ||||||||||||||||||||||||||| Sbjct 660 TGCCACAAGCCAGTTATCCCTGTGGTA 686 Score = 84.2 bits (92), Expect = 4e-14 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 216 GTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACA 275 |||||||||||| |||||||||| ||||||| ||| ||||||||||||||||||| Sbjct 1119 GTAACTTTTCTGACACCTCTAGCGTCAAATTCCGACAAGCTAAAGGATCGATAGGCCATG 1178 Query 276 CTTTCATGGTTTGT 289 |||||| |||||| Sbjct 1179 CTTTCACAGTTTGT 1192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854381903808