Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016-
12-02] 2,118 sequences; 10,057,911 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq1970 111 6e-22
seq348 75.2 4e-11
seq16 75.2 4e-11
>seq1970
Length=539
Score = 111 bits (122), Expect = 6e-22
Identities = 126/169 (75%), Gaps = 0/169 (0%)
Strand=Plus/Plus
Query 135 ACGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTC 194
||||| |||| ||| |||||| ||||||||||||||| | ||||||||||||||||||
Sbjct 371 ACGCTTTACCTCAATAAATTTCGCGGAGAACCAGCTATCTCTAAGTTTGATTGGCCTTTC 430
Query 195 ACCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCG 254
||||||| || || ||||| | || |||| | || |||||| ||||||
Sbjct 431 ACCCCTAGCCTCAACTCATCTGCGTCTATTGCAACAGACGTCAGTTCGGCCCTCCAAAAA 490
Query 255 GTCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGG 303
| |||||| ||||| |||| || | |||||||||| | ||||||
Sbjct 491 CTTTTACCCTTTCTTCAGCCTGGTCAAAGCTAGATCACTTAGTTTCGGG 539
>seq348
Length=7419
Score = 75.2 bits (82), Expect = 4e-11
Identities = 75/95 (79%), Gaps = 2/95 (2%)
Strand=Plus/Plus
Query 472 TTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTT 530
||||||||||| ||| |||| | || ||| ||||||| ||||||||||||||||||
Sbjct 3366 TTTCAGGTACTTTTTAACTCTCTTTTCAAAGGT-CTTTTCATCTTTCCCTCACGGTACTT 3424
Query 531 GTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
|| ||||||||||| | | ||||||| ||||
Sbjct 3425 GTTCGCTATCGGTCTCTCGCCAATATTTAGCCTTA 3459
>seq16
Length=50947
Score = 75.2 bits (82), Expect = 4e-11
Identities = 75/95 (79%), Gaps = 2/95 (2%)
Strand=Plus/Plus
Query 472 TTTCAGGTACTATTTCACTCCCCGC-CAGGGGTACTTTTCACCTTTCCCTCACGGTACTT 530
||||||||||| ||| |||| | || ||| ||||||| ||||||||||||||||||
Sbjct 3366 TTTCAGGTACTTTTTAACTCTCTTTTCAAAGGT-CTTTTCATCTTTCCCTCACGGTACTT 3424
Query 531 GTCCGCTATCGGTCACCAAGGAGTATTTAGGCTTA 565
|| ||||||||||| | | ||||||| ||||
Sbjct 3425 GTTCGCTATCGGTCTCTCGCCAATATTTAGCCTTA 3459
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817561503232
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |