Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq348 132 5e-29 seq16 132 5e-29 >seq348 Length=7419 Score = 132 bits (146), Expect = 5e-29 Identities = 137/177 (77%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 |||||||||||||||||||| ||||||||| ||| | ||| ||||| |||| ||||||| Sbjct 5446 TTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTACGCTTGAATATATTAGCATGGAA 5387 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| | ||||||| | | || |||| | || || ||| || | |||||||| || Sbjct 5386 TAACACTATAGGAC-TCCTGTCCTATCTCGTTGG--TCTCGGGATGGGAGTAATGATTAA 5330 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | | ||| ||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 5329 GAGGAACAGTTGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 5273 >seq16 Length=50947 Score = 132 bits (146), Expect = 5e-29 Identities = 137/177 (77%), Gaps = 3/177 (2%) Strand=Plus/Minus Query 14 TTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATTACCATGGAA 73 |||||||||||||||||||| ||||||||| ||| | ||| ||||| |||| ||||||| Sbjct 5446 TTACTTTGAAAAAATTAGAGTGTTCAAAGCGGGCTTACGCTTGAATATATTAGCATGGAA 5387 Query 74 TAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAA 133 ||| | ||||||| | | || |||| | || || ||| || | |||||||| || Sbjct 5386 TAACACTATAGGAC-TCCTGTCCTATCTCGTTGG--TCTCGGGATGGGAGTAATGATTAA 5330 Query 134 TACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGATTTAT 190 | | | ||| ||||| | ||||| ||||||| ||||||||||||||||||||| Sbjct 5329 GAGGAACAGTTGGGGGCATTCGTATTTCATTGTCAGAGGTGAAATTCTTGGATTTAT 5273 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511989494720