Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016-
12-02] 2,118 sequences; 10,057,911 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq348 356 4e-96
seq16 356 4e-96
>seq348
Length=7419
Score = 356 bits (394), Expect = 4e-96
Identities = 267/310 (86%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||||| || ||||||| | ||||||||
Sbjct 4870 GAACGAGACCTCAGCCTGCTAAATAGTACGGCCCTATTCTTAGGGTCGC-GACTTCTTAG 4812
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| || | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4811 AGGGACTATGTGCGTTTAGCACATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 4752
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| || ||||||| | || |||||||||
Sbjct 4751 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGACTCAACGAGCTTATAACCTTGGCC 4692
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| |||||||||||||||| ||| || |||||| |||||||||| ||||||||||||
Sbjct 4691 GAAAGGTCTGGGTAATCT--CCAAATTCCGTCGTGATGGGGATAGATTATTGCAATTATT 4634
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 4633 AATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 4574
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 4573 GCCCTTTGTA 4564
>seq16
Length=50947
Score = 356 bits (394), Expect = 4e-96
Identities = 267/310 (86%), Gaps = 4/310 (1%)
Strand=Plus/Minus
Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79
|| |||||||| | |||||||||||| ||||| || ||||||| | ||||||||
Sbjct 4870 GAACGAGACCTCAGCCTGCTAAATAGTACGGCCCTATTCTTAGGGTCGC-GACTTCTTAG 4812
Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138
||||||||| || | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct 4811 AGGGACTATGTGCGTTTAGCACATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 4752
Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198
||||||||||||||||||||||||||||||||| || ||||||| | || |||||||||
Sbjct 4751 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGACTCAACGAGCTTATAACCTTGGCC 4692
Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258
| |||||||||||||||| ||| || |||||| |||||||||| ||||||||||||
Sbjct 4691 GAAAGGTCTGGGTAATCT--CCAAATTCCGTCGTGATGGGGATAGATTATTGCAATTATT 4634
Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318
|||||||||||||||||||||||||||| ||||||||| |||||||||||||||||
Sbjct 4633 AATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 4574
Query 319 GCCCTTTGTA 328
||||||||||
Sbjct 4573 GCCCTTTGTA 4564
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947179938304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |