Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq348 356 4e-96 seq16 356 4e-96 >seq348 Length=7419 Score = 356 bits (394), Expect = 4e-96 Identities = 267/310 (86%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||| | |||||||||||| ||||| || ||||||| | |||||||| Sbjct 4870 GAACGAGACCTCAGCCTGCTAAATAGTACGGCCCTATTCTTAGGGTCGC-GACTTCTTAG 4812 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| || | ||| |||||||||||||||||||||||||||||||||||||| Sbjct 4811 AGGGACTATGTGCGTTTAGCACATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 4752 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| || ||||||| | || ||||||||| Sbjct 4751 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGACTCAACGAGCTTATAACCTTGGCC 4692 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||||||||||||| ||| || |||||| |||||||||| |||||||||||| Sbjct 4691 GAAAGGTCTGGGTAATCT--CCAAATTCCGTCGTGATGGGGATAGATTATTGCAATTATT 4634 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 4633 AATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 4574 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 4573 GCCCTTTGTA 4564 >seq16 Length=50947 Score = 356 bits (394), Expect = 4e-96 Identities = 267/310 (86%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||| | |||||||||||| ||||| || ||||||| | |||||||| Sbjct 4870 GAACGAGACCTCAGCCTGCTAAATAGTACGGCCCTATTCTTAGGGTCGC-GACTTCTTAG 4812 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| || | ||| |||||||||||||||||||||||||||||||||||||| Sbjct 4811 AGGGACTATGTGCGTTTAGCACATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 4752 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| || ||||||| | || ||||||||| Sbjct 4751 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGGACTCAACGAGCTTATAACCTTGGCC 4692 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | |||||||||||||||| ||| || |||||| |||||||||| |||||||||||| Sbjct 4691 GAAAGGTCTGGGTAATCT--CCAAATTCCGTCGTGATGGGGATAGATTATTGCAATTATT 4634 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 4633 AATCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 4574 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 4573 GCCCTTTGTA 4564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947179938304