Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1970 114 4e-23 >seq1970 Length=539 Score = 114 bits (126), Expect = 4e-23 Identities = 180/251 (72%), Gaps = 5/251 (2%) Strand=Plus/Minus Query 37 CCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGT 96 |||||||| |||||||||| | || ||||| ||||| ||||| | |||||| Sbjct 539 CCCGAAACTAAGTGATCTAGCTTTGACCAGGCTGAAGAAAGGGTAAAAGTTTTTGGAGGG 480 Query 97 CCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAA 156 |||||| || ||||| || | | |||||| || || |||||||||||||| || Sbjct 479 CCGAACTGACGTCTGTTGCAATAGACGCAGATGAGTTGAGGCTAGGGGTGAAAGGCCAAT 420 Query 157 CAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC-CTCAAGTATCAC 215 ||||||| || ||||||||||||| ||||| |||| ||||| || |||| | Sbjct 419 CAAACTTAGAGATAGCTGGTTCTCCGCGAAATTTATTGAGGTAAAGCGTTCAATGAGAGA 360 Query 216 CATCGGGGGTAGAGCACT-GTTATGGCTAGGGGGTCATTGCGACTTACCAAAC-CATTGC 273 | |||||||||||||| ||| | ||||| || | ||||| |||| |||| Sbjct 359 GAAAGGGGGTAGAGCACTCATTAGGTAAAGGGGATC-CAAAGTCTTACTAAACGTATTG- 302 Query 274 AAACTCCGAAT 284 ||||||||||| Sbjct 301 AAACTCCGAAT 291 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689564214272