Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016-
12-02] 2,118 sequences; 10,057,911 total letters
Query= AAMG01002193.1
Length=560
Score E
Sequences producing significant alignments: (Bits) Value
seq1970 114 4e-23
>seq1970
Length=539
Score = 114 bits (126), Expect = 4e-23
Identities = 180/251 (72%), Gaps = 5/251 (2%)
Strand=Plus/Minus
Query 37 CCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGGT 96
|||||||| |||||||||| | || ||||| ||||| ||||| | ||||||
Sbjct 539 CCCGAAACTAAGTGATCTAGCTTTGACCAGGCTGAAGAAAGGGTAAAAGTTTTTGGAGGG 480
Query 97 CCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAAA 156
|||||| || ||||| || | | |||||| || || |||||||||||||| ||
Sbjct 479 CCGAACTGACGTCTGTTGCAATAGACGCAGATGAGTTGAGGCTAGGGGTGAAAGGCCAAT 420
Query 157 CAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAGTGC-CTCAAGTATCAC 215
||||||| || ||||||||||||| ||||| |||| ||||| || |||| |
Sbjct 419 CAAACTTAGAGATAGCTGGTTCTCCGCGAAATTTATTGAGGTAAAGCGTTCAATGAGAGA 360
Query 216 CATCGGGGGTAGAGCACT-GTTATGGCTAGGGGGTCATTGCGACTTACCAAAC-CATTGC 273
| |||||||||||||| ||| | ||||| || | ||||| |||| ||||
Sbjct 359 GAAAGGGGGTAGAGCACTCATTAGGTAAAGGGGATC-CAAAGTCTTACTAAACGTATTG- 302
Query 274 AAACTCCGAAT 284
|||||||||||
Sbjct 301 AAACTCCGAAT 291
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1689564214272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |