Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq348 666 0.0 seq16 666 0.0 >seq348 Length=7419 Score = 666 bits (738), Expect = 0.0 Identities = 467/529 (88%), Gaps = 10/529 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 1230 CTTTTATTCCACAAGAGATTTCTGTTCTCTTTGAGCTCATCTTAGGACACCTGCGTTATC 1289 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct 1290 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCTGGATC 1349 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || || || || |||| || | | || || ||| | |||| || Sbjct 1350 GTAT----AAATAC-TTGGGGCTAGAAGCAGGACCGG--AGTCCGCCTCCACCTCATGGA 1402 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||| |||| |||| ||||||||||||||| | ||||||| ||||||||||| Sbjct 1403 ATAAGTAAAATAACGTTAAGAGTAGTGGTATTTCACGTTCGCCGAA---GCTCCCACTTA 1459 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1460 TTCTACACCTCCTAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 1519 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1520 TTTCCCCGCCGTTTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 1579 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1580 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 1639 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1640 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 1699 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1700 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAAAGTGTCAACATC 1748 >seq16 Length=50947 Score = 666 bits (738), Expect = 0.0 Identities = 467/529 (88%), Gaps = 10/529 (2%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||||| || ||| ||||||||||||||| |||| | ||||||||||||||||||| Sbjct 1230 CTTTTATTCCACAAGAGATTTCTGTTCTCTTTGAGCTCATCTTAGGACACCTGCGTTATC 1289 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||||| Sbjct 1290 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCTGGATC 1349 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186 | || || || || |||| || | | || || ||| | |||| || Sbjct 1350 GTAT----AAATAC-TTGGGGCTAGAAGCAGGACCGG--AGTCCGCCTCCACCTCATGGA 1402 Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246 ||||||||| |||| |||| ||||||||||||||| | ||||||| ||||||||||| Sbjct 1403 ATAAGTAAAATAACGTTAAGAGTAGTGGTATTTCACGTTCGCCGAA---GCTCCCACTTA 1459 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1460 TTCTACACCTCCTAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 1519 Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||||||||| | ||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 1520 TTTCCCCGCCGTTTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 1579 Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1580 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 1639 Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1640 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 1699 Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||| | ||||||||| Sbjct 1700 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAAAGTGTCAACATC 1748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635165366464