Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016-
12-02] 2,118 sequences; 10,057,911 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq348 666 0.0
seq16 666 0.0
>seq348
Length=7419
Score = 666 bits (738), Expect = 0.0
Identities = 467/529 (88%), Gaps = 10/529 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 1230 CTTTTATTCCACAAGAGATTTCTGTTCTCTTTGAGCTCATCTTAGGACACCTGCGTTATC 1289
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||
Sbjct 1290 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCTGGATC 1349
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
| || || || || |||| || | | || || ||| | |||| ||
Sbjct 1350 GTAT----AAATAC-TTGGGGCTAGAAGCAGGACCGG--AGTCCGCCTCCACCTCATGGA 1402
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||| |||| |||| ||||||||||||||| | ||||||| |||||||||||
Sbjct 1403 ATAAGTAAAATAACGTTAAGAGTAGTGGTATTTCACGTTCGCCGAA---GCTCCCACTTA 1459
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1460 TTCTACACCTCCTAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 1519
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1520 TTTCCCCGCCGTTTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 1579
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1580 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 1639
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1640 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 1699
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1700 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAAAGTGTCAACATC 1748
>seq16
Length=50947
Score = 666 bits (738), Expect = 0.0
Identities = 467/529 (88%), Gaps = 10/529 (2%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||||| || ||| ||||||||||||||| |||| | |||||||||||||||||||
Sbjct 1230 CTTTTATTCCACAAGAGATTTCTGTTCTCTTTGAGCTCATCTTAGGACACCTGCGTTATC 1289
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126
|||||||||||||||||||||||||||||||||||||||||||||| || ||| |||||
Sbjct 1290 TTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCTTCCACCTGGATC 1349
Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGA 186
| || || || || |||| || | | || || ||| | |||| ||
Sbjct 1350 GTAT----AAATAC-TTGGGGCTAGAAGCAGGACCGG--AGTCCGCCTCCACCTCATGGA 1402
Query 187 TTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTA 246
||||||||| |||| |||| ||||||||||||||| | ||||||| |||||||||||
Sbjct 1403 ATAAGTAAAATAACGTTAAGAGTAGTGGTATTTCACGTTCGCCGAA---GCTCCCACTTA 1459
Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1460 TTCTACACCTCCTAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 1519
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||||||||| | ||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1520 TTTCCCCGCCGTTTCTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 1579
Query 367 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1580 GGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATT 1639
Query 427 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1640 TGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCT 1699
Query 487 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct 1700 TCACTTTGACATTCAGAGCACTGGGCAGAAATCACAAAGTGTCAACATC 1748
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635165366464
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |