Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bathycoccus_20sp._20TOSAG39-1_20[genbank_20GCA_5F900128745.1_202016- 12-02] 2,118 sequences; 10,057,911 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq11 165 6e-36 >seq11 Length=57886 Score = 165 bits (182), Expect = 6e-36 Identities = 450/681 (66%), Gaps = 6/681 (1%) Strand=Plus/Plus Query 66014 GATGCGAGGTTGCAGACAGCTATCTCGTCAGGAGCGGTATACTCGACAATTTCGGTGCAC 66073 ||||| | |||||| || || | || || || | || || ||||| || || || ||| Sbjct 11691 GATGCCAAGTTGCAAACGGCGGTTTCTTCTGGTGAAGTGTATTCGACGATCTCTGTACAC 11750 Query 66074 AGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGATTACTCTTGCGATTGCATGCATCC 66133 | || | || ||||| ||||| ||||| || |||||| ||||| |||||| Sbjct 11751 AAGTTGGACGATTTGATCGTGCCTAAATTTTGTTGGTTTGACTTGCGGTTGCACGCATCC 11810 Query 66134 TTGTACATCATGTACGGAGTGCCGGTCTCAACTTGGGACTCAATGATGGCGTGCCAAAGA 66193 || ||| |||||| || |||| || || ||||| | || | || || |||||| Sbjct 11811 TTAAACAACATGTATGGGTTGCCAGTTTCCACTTGCGCTTCGAGAATAGCAAACCAAAGC 11870 Query 66194 GCGCGTGCCTTCACCGTACGTACCGCCCTACCTTTG-CGTTCGTAATGTTCGTAGAGGTG 66252 | || || | || | | ||||| ||| | |||||| | ||| || Sbjct 11871 TGCTGGGCATTAATTGT-CTTCTTGCCCTTGTTTTCTCTTTCGTACTTGGTGTACAGAGC 11929 Query 66253 TTCGAAGGATTCACCCCATACTTCGGACAGACATGGACACTTGTGTGGACACATCAGCGA 66312 |||||| ||||||||| |||||||| || || |||| || || |||||||| | Sbjct 11930 TTCGAATTCTTCACCCCAGCATTCGGACAAACCCGGGCACTCGTTCGGGCACATCAGTGT 11989 Query 66313 CCAATCACCATCCTGTTCTACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAA 66372 ||| | || | | ||| || | ||| || | ||| |||| | | |||| || Sbjct 11990 CCACTTGCCGTTTTCTTCGACTCTTTTCATGAACAAATCGTTCGTCCACAAGCCGTAAAA 12049 Query 66373 GAGATCGCGTGCTCGTTGCTCCT-CAATGCCGTGATTTTTGCGCAAGTCGAGGAACTCAA 66431 | || || |||| | ||| || | ||||||| || || | ||| ||||| | || | Sbjct 12050 CAAGTCACGAGCTC-TAGCTTCTTCCTTGCCGTGGTTCTTTCTCAAATCGAGCCAGTCGA 12108 Query 66432 AGATGTCGGCATGCCATGGTTCCAGGTAGATGGCGAACGAGCCCATACGTTTGCCGCCAC 66491 ||||||| | ||||||||||| || |||||||| || | |||| | || || ||||| | Sbjct 12109 AGATGTCCGAGTGCCATGGTTCGAGATAGATGGCAAAAGCGCCCTTGCGCTTACCGCCGC 12168 Query 66492 CTTGGTCGACGTAGCGAGCGACATTGTTGAAGACACGCAACATCGGTACGAGCCCGTTAG 66551 ||||||| || || | || | |||||| || || | |||||| | | ||||| | Sbjct 12169 CTTGGTCCACATACCTCGCTGTGTCGTTGAACACCCGAAGCATCGGAATAATACCGTTCG 12228 Query 66552 ATTTGCCATTGGTGCCGTCGATGGGGGATCCTCGT-GCCCGTATATCGTGAACATTCAGA 66610 | | || || ||||| ||| || ||| || || || ||||||| || | Sbjct 12229 AAGTACCGTTTGTGCCTCTGATATACGA-AGACGTGGCACGGATGTCGTGAATGGACAAA 12287 Query 66611 CCAATACCACCGGCCGTCTTCGAGATGGCAGCACAATCGGCCACTGTCCGGAATATGCCG 66670 || ||||||||||| | ||| || ||| || || || || || | | || || Sbjct 12288 CCGATACCACCGGCGGACTTGGAAATGCACGCGCACTCCTTCAACGTGTCGTAGATACCT 12347 Query 66671 TCAATGGAGTCACCCTTGATG 66691 ||||||||||| |||| ||| Sbjct 12348 TCAATGGAGTCTTCCTTCATG 12368 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397557737527520