Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq78 75.2 2e-11 >seq78 Length=529014 Score = 75.2 bits (82), Expect = 2e-11 Identities = 104/143 (73%), Gaps = 2/143 (1%) Strand=Plus/Plus Query 193 GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC-GTGATGGA 251 ||| |||| || |||||||| ||| | |||| ||||| | | |||| | ||| |||| Sbjct 289993 GACCCGAACCCGGGTGATCTAACCATGGCCAGGATGAAGCCTAGTTAACACCGTG-TGGA 290051 Query 252 GGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGCC 311 ||| ||||| | | |||||| | || | |||||| | | || ||||||||||| || Sbjct 290052 AGACAGAACCCATCGATGTTGAACAATTGTGGGATGAGTTGTGGTTAGGGGTGAAATACC 290111 Query 312 AATCAAACTGGGAAATAGCTCGT 334 ||| |||| ||| ||||| || Sbjct 290112 TATCTAACTCGGAGCTAGCTGGT 290134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972773238272