Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq20 295 3e-77 seq763 291 3e-76 seq686 291 3e-76 seq40 291 3e-76 seq141 289 1e-75 seq65 259 2e-66 seq1 188 3e-45 seq1155 122 4e-25 >seq20 Length=848245 Score = 295 bits (326), Expect = 3e-77 Identities = 473/661 (72%), Gaps = 29/661 (4%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||| |||||| |||||||||||||||||| | || || ||||||| | ||||| | Sbjct 384746 TTCGCAGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAAGG 384805 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||| ||| ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 384806 CTAAATATCGGCGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 384865 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| | |||||||||||| ||||| | || | || || Sbjct 384866 TTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGAGGGGGAACGGAATGGAGGCA-ACG 384924 Query 214 --TGCCCGCAGTTGCTCAA-CCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTCAGGCCA 269 ||| | ||| ||| | |||| || || |||| |||| | | | | | || || Sbjct 384925 GGTGCGCCCAG--GCTTACGCCGGTCCGACGACCGGCTGCATGCGCCGGGCG-CTGGTCA 384981 Query 270 GCATCAGCTCGGGCGGTCGGATAAAGGCCCCGG-GAATGTGGCCCC-CTTCGGGGGGTGT 327 ||||| | | | | || ||| || || ||| || || | || ||| | | Sbjct 384982 GCATCGGGTGGCGGGGCGGGACAA---CCGCGGCGATTGATACGCCGCTTATGTCGCCCC 385038 Query 328 TATAGCCCGGGGTGGAATGCGGCCCGCCTGGAC-TGAGGTCCGCGCTCCGGCTA--GGAT 384 | ||||| |||||| || ||| | | | | || | || |||| | |||| Sbjct 385039 GGT-GCCCGAGGTGGATGGC----CGCTTAGTCCTTCGG---GAACTGCGGCCACAGGAT 385090 Query 385 GCTGGCG-TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCT 443 ||||||| | | || | | ||||||||| ||||||||||||||||| ||||| Sbjct 385091 GCTGGCGATTGAGCTTCCACTCTACCCGTCTTGAAACACGGACCAAGGAGTACAACATGC 385150 Query 444 ATGCGAGTGTTTGGGTGTCAAACCC-GTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502 ||||||| ||||| ||||||| || ||| || ||| ||| || || | | Sbjct 385151 ATGCGAGCTGGCGGGTGGCAAACCCCGTAAGCGCAAGGAACCTGACTGGTGGGATGGCTC 385210 Query 503 CGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAG 562 || | ||||||||| ||||| | |||| | | || | ||||||| |||||| Sbjct 385211 CG---GCCTGCACCATCAACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATGT 385267 Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622 ||||| |||||||||||||||||||||||||||| |||| |||||||||||||||||| Sbjct 385268 TTGTTGTGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCT 385327 Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682 |||||||||||| || || ||| ||||||||||| | || | ||||||||||||||| Sbjct 385328 GGTGGAGGCTCGTAGATGTGCTGACGTGCAAATCGCTTTTCGGACTTGGGTATAGGGGCG 385387 Query 683 A 683 | Sbjct 385388 A 385388 >seq763 Length=21608 Score = 291 bits (322), Expect = 3e-76 Identities = 470/659 (71%), Gaps = 25/659 (4%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||| |||||| |||||||||||||||||| | || || ||||||| | ||||| | Sbjct 11167 TTCGCAGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAAGG 11108 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||| ||| ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 11107 CTAAATATCGGCGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 11048 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| | |||||||||||| ||||| | || | || || Sbjct 11047 TTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGAGGGGGAACGGAATGGAGGCA-ACG 10989 Query 214 TGCCCGCAGTTGCTCAA-CCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTCAGGCCAGC 271 | ||| ||| | |||| || || |||| |||| | | | | | || |||| Sbjct 10988 GGTGCGCCCGGGCTTACGCCGGTCCGACGACCGGCTGCATGCGCCGGGCG-CTGGTCAGC 10930 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGG-GAATGTGGCCCC-CTTCGGGGGGTGTTA 329 ||| | | | | || ||| || || ||| || || | || ||| | | Sbjct 10929 ATCGGGTGGCGGGGCGGGACAA---CCGCGGCGATTGATACGCCGCTTATGTCGCCCCGG 10873 Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGAC-TGAGGTCCGCGCTCCGGCTA--GGATGC 386 | ||||| |||||| || ||| | | | | || | || |||| | |||||| Sbjct 10872 T-GCCCGAGGTGGATGGC----CGCTTAGTCCTTCGG---GAACTGCGGCCACAGGATGC 10821 Query 387 TGGCG-TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||| | | || | | ||||||||| ||||||||||||||||| ||||| || Sbjct 10820 TGGCGATTGAGCTTCCACTCTACCCGTCTTGAAACACGGACCAAGGAGTACAACATGCAT 10761 Query 446 GCGAGTGTTTGGGTGTCAAACCC-GTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 ||||| ||||| ||||||| || ||| || ||| ||| || || | ||| Sbjct 10760 GCGAGCTGGCGGGTGGCAAACCCCGTAAGCGCAAGGAACCTGACTGGTGGGATGGCTCCG 10701 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | ||||||||| ||||| | |||| | | || | ||||||| |||||| | Sbjct 10700 ---GCCTGCACCATCAACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATCTTT 10644 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 10643 GTTGTGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGG 10584 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| || || ||| ||||||||||| | || | |||||||||||||||| Sbjct 10583 TGGAGGCTCGTAGATGTGCTGACGTGCAAATCGCTTTTCGGACTTGGGTATAGGGGCGA 10525 >seq686 Length=35560 Score = 291 bits (322), Expect = 3e-76 Identities = 470/659 (71%), Gaps = 25/659 (4%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||| |||||| |||||||||||||||||| | || || ||||||| | ||||| | Sbjct 6277 TTCGCAGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAAGG 6218 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||| ||| ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 6217 CTAAATATCGGCGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 6158 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| | |||||||||||| ||||| | || | || || Sbjct 6157 TTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGAGGGGGAACGGAATGGAGGCA-ACG 6099 Query 214 TGCCCGCAGTTGCTCAA-CCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTCAGGCCAGC 271 | ||| ||| | |||| || || |||| |||| | | | | | || |||| Sbjct 6098 GGTGCGCCCGGGCTTACGCCGGTCCGACGACCGGCTGCATGCGCCGGGCG-CTGGTCAGC 6040 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGG-GAATGTGGCCCC-CTTCGGGGGGTGTTA 329 ||| | | | | || ||| || || ||| || || | || ||| | | Sbjct 6039 ATCGGGTGGCGGGGCGGGACAA---CCGCGGCGATTGATACGCCGCTTATGTCGCCCCGG 5983 Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGAC-TGAGGTCCGCGCTCCGGCTA--GGATGC 386 | ||||| |||||| || ||| | | | | || | || |||| | |||||| Sbjct 5982 T-GCCCGAGGTGGATGGC----CGCTTAGTCCTTCGG---GAACTGCGGCCACAGGATGC 5931 Query 387 TGGCG-TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||| | | || | | ||||||||| ||||||||||||||||| ||||| || Sbjct 5930 TGGCGATTGAGCTTCCACTCTACCCGTCTTGAAACACGGACCAAGGAGTACAACATGCAT 5871 Query 446 GCGAGTGTTTGGGTGTCAAACCC-GTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 ||||| ||||| ||||||| || ||| || ||| ||| || || | ||| Sbjct 5870 GCGAGCTGGCGGGTGGCAAACCCCGTAAGCGCAAGGAACCTGACTGGTGGGATGGCTCCG 5811 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | ||||||||| ||||| | |||| | | || | ||||||| |||||| | Sbjct 5810 ---GCCTGCACCATCAACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATGTTT 5754 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 5753 GTTGTGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGG 5694 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| || || ||| ||||||||||| | || | |||||||||||||||| Sbjct 5693 TGGAGGCTCGTAGATGTGCTGACGTGCAAATCGCTTTTCGGACTTGGGTATAGGGGCGA 5635 >seq40 Length=674714 Score = 291 bits (322), Expect = 3e-76 Identities = 470/659 (71%), Gaps = 25/659 (4%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||| |||||| |||||||||||||||||| | || || ||||||| | ||||| | Sbjct 176279 TTCGCAGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAAGG 176220 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||| ||| ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 176219 CTAAATATCGGCGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 176160 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| | |||||||||||| ||||| | || | || || Sbjct 176159 TTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGAGGGGGAACGGAATGGAGGCA-ACG 176101 Query 214 TGCCCGCAGTTGCTCAA-CCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTCAGGCCAGC 271 | ||| ||| | |||| || || |||| |||| | | | | | || |||| Sbjct 176100 GGTGCGCCCGGGCTTACGCCGGTCCGACGACCGGCTGCATGCGCCGGGCG-CTGGTCAGC 176042 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGG-GAATGTGGCCCC-CTTCGGGGGGTGTTA 329 ||| | | | | || ||| || || ||| || || | || ||| | | Sbjct 176041 ATCGGGTGGCGGGGCGGGACAA---CCGCGGCGATTGATACGCCGCTTATGTCGCCCCGG 175985 Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGAC-TGAGGTCCGCGCTCCGGCTA--GGATGC 386 | ||||| |||||| || ||| | | | | || | || |||| | |||||| Sbjct 175984 T-GCCCGAGGTGGATGGC----CGCTTAGTCCTTCGG---GAACTGCGGCCACAGGATGC 175933 Query 387 TGGCG-TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||| | | || | | ||||||||| ||||||||||||||||| ||||| || Sbjct 175932 TGGCGATTGAGCTTCCACTCTACCCGTCTTGAAACACGGACCAAGGAGTACAACATGCAT 175873 Query 446 GCGAGTGTTTGGGTGTCAAACCC-GTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 ||||| ||||| ||||||| || ||| || ||| ||| || || | ||| Sbjct 175872 GCGAGCTGGCGGGTGGCAAACCCCGTAAGCGCAAGGAACCTGACTGGTGGGATGGCTCCG 175813 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | ||||||||| ||||| | |||| | | || | ||||||| |||||| | Sbjct 175812 ---GCCTGCACCATCAACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATGTTT 175756 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 175755 GTTGTGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGG 175696 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||||||||| || || ||| ||||||||||| | || | |||||||||||||||| Sbjct 175695 TGGAGGCTCGTAGATGTGCTGACGTGCAAATCGCTTTTCGGACTTGGGTATAGGGGCGA 175637 >seq141 Length=398432 Score = 289 bits (320), Expect = 1e-75 Identities = 470/662 (71%), Gaps = 31/662 (5%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||| |||||| |||||||||||||||||| | || || ||||||| | ||||| | Sbjct 390252 TTCGCAGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAAGG 390311 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||| ||| ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 390312 CTAAATATCGGCGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 390371 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| ||||||||| |||||| | |||||||||||| ||||| | || | || || Sbjct 390372 TTGAAAAGAGAGTCAAAAAGTGCTTGAAATTGTTGAGGGGGAACGGAATGGAGGCA-ACG 390430 Query 214 TGCCCGCAGTTGCTCAA-CCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTCAGGCCAGC 271 | ||| ||| | |||| || || |||| |||| | | | | | || |||| Sbjct 390431 GGTGCGCCCGGGCTTACGCCGGTCCGACGACCGGCTGCATGCGCCGGGCG-CTGGTCAGC 390489 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGG-GAATGTGGCCCC-CTTCGGGGGGTGTTA 329 ||| | | | | || ||| || || ||| || || | || ||| | | Sbjct 390490 ATCGGGTGGCGGGGCGGGACAA---CCGCGGCGATTGATACGCCGCTTATGTCGCCCCGG 390546 Query 330 TAGCCCGGGGTGGAATGCGGC-----CCGCCTGGA-CTGAGGTCCGCGCTCCGGCTAGGA 383 | ||||| |||||| || || || | ||| ||| || || | |||| Sbjct 390547 T-GCCCGAGGTGGATGGCTGCTTAGTCCTTCGGGAACTGCGG-CCAC---------AGGA 390595 Query 384 TGCTGGCG-TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442 |||||||| | | || | | ||||||||| ||||||||||||||||| ||||| Sbjct 390596 TGCTGGCGATTGAGCTTCCACTCTACCCGTCTTGAAACACGGACCAAGGAGTACAACATG 390655 Query 443 TATGCGAGTGTTTGGGTGTCAAACCC-GTGCGCGTAATGAAAGTGAACGGAGGTGGGAAC 501 ||||||| ||||| ||||||| || ||| || ||| ||| || || | Sbjct 390656 CATGCGAGCTGGCGGGTGGCAAACCCCGTAAGCGCAAGGAACCTGACTGGTGGGATGGCT 390715 Query 502 CCGTGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATA 561 ||| | ||||||||| ||||| | |||| | | || | ||||||| |||||| Sbjct 390716 CCG---GCCTGCACCATCAACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATG 390772 Query 562 GCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621 ||||| |||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct 390773 TTTGTTGTGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTC 390832 Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGC 681 ||||||||||||| || || ||| ||||||||||| | || | |||||||||||||| Sbjct 390833 TGGTGGAGGCTCGTAGATGTGCTGACGTGCAAATCGCTTTTCGGACTTGGGTATAGGGGC 390892 Query 682 GA 683 || Sbjct 390893 GA 390894 >seq65 Length=559413 Score = 259 bits (286), Expect = 2e-66 Identities = 447/633 (71%), Gaps = 25/633 (4%) Strand=Plus/Minus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAG 93 |||| |||||| |||||||||||||||||| | || || ||||||| | ||||| | Sbjct 116048 TTCGCAGAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAAGG 115989 Query 94 CTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACT 153 |||||||| ||| ||||||||||||| ||||||| |||| ||||||||||||| ||| Sbjct 115988 CTAAATATCGGCGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACT 115929 Query 154 TTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCGCTTGCAACCAGACT 213 ||| |||||| || |||||| | |||||||||||| ||||| | || | || || Sbjct 115928 TTGAAAAGAGGGTCAAAAAGTGCTTGAAATTGTTGAGGGGGAACGGAATGGAGGCA-ACG 115870 Query 214 TGCCCGCAGTTGCTCAA-CCGGCCCCTCGGCCGG-TGCACTCTTCTGCGGTCAGGCCAGC 271 | ||| | | | |||| || || |||| |||| | | | | | || |||| Sbjct 115869 GGTGCGCCCGGGATTACGCCGGTCCGACGACCGGCTGCATACGCCGGGCG-CTGGTCAGC 115811 Query 272 ATCAGCTCGGGCGGTCGGATAAAGGCCCCGG-GAATGTGGCCCC-CTTCGGGGGGTGTTA 329 ||| | | | | || ||| || || ||| || || | | ||| | | Sbjct 115810 ATCGGGTGGCGGGGCGGGACAA---CCGCGGCGATTGATACGTCGCTTATGTCGCCCCGG 115754 Query 330 TAGCCCGGGGTGGAATGCGGCCCGCCTGGAC-TGAGGTCCGCGCTCCGGCTA--GGATGC 386 | ||||| |||||| || ||| | | | | || | || |||| | |||||| Sbjct 115753 T-GCCCGAGGTGGATGGC----CGCTTAGTCCTTCGG---GAACTGCGGCCACAGGATGC 115702 Query 387 TGGCG-TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTAT 445 ||||| | | || | | ||||||||| ||||||||||||||||| ||||| || Sbjct 115701 TGGCGATTGAGCTTCCACTCTACCCGTCTTGAAACACGGACCAAGGAGTACAACATGCAT 115642 Query 446 GCGAGTGTTTGGGTGTCAAACCC-GTGCGCGTAATGAAAGTGAACGGAGGTGGGAACCCG 504 ||||| ||||| ||||||| || ||| || ||| ||| || || | ||| Sbjct 115641 GCGAGCTGGCGGGTGGCAAACCCCGTAAGCGCAAGGAACCTGACTGGTGGGATGGCTCCG 115582 Query 505 TGAGGGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCT 564 | ||||||||| ||||| | |||| | | || | ||||||| |||||| | Sbjct 115581 ---GCCTGCACCATCAACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATGTTT 115525 Query 565 GTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGG 624 |||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||| Sbjct 115524 GTTGTGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGAGGAAACTCTGG 115465 Query 625 TGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCG 657 |||||||||| || || ||| ||||||||||| Sbjct 115464 TGGAGGCTCGTAGATGTGCTGACGTGCAAATCG 115432 >seq1 Length=1870169 Score = 188 bits (208), Expect = 3e-45 Identities = 236/319 (74%), Gaps = 15/319 (5%) Strand=Plus/Plus Query 380 AGGATGCTGGCG-TAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAA 438 |||||||||||| | | || | | |||||||||| ||||||||||||||||| || Sbjct 796975 AGGATGCTGGCGATTGAGCTTCCACTCTGCCCGTCTTGAAACACGGACCAAGGAGTACAA 797034 Query 439 CATCTATGCGAGTGTTTGGGTGTCAAACCC-GTGCGCGTAATGAAAGTGAACGGAGG--T 495 ||| |||||||| ||||| | ||||| || | | || ||| ||| || || | Sbjct 797035 CATGCATGCGAGTTGGCGGGTGGCTAACCCCGTAAGGGCAAGGAATCTGACTGGTGGGAT 797094 Query 496 GG----GAAC----CCGTGAGGGTGC---ACCATCGACCGATCCTGATGTCTTCGGATGG 544 || | | ||||| ||||| |||| | ||||| | |||| | | || | Sbjct 797095 GGCTCTGTATTCGGCCGTGCAGGTGCCTCACCACCAACCGACCATGATCTTCTGTGAAAG 797154 Query 545 ATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGT 604 | |||| |||||| ||||| |||||||||||||||||||||||||||| |||| Sbjct 797155 GCTCGAGTGCGAGCATGTTTGTTGTGACCCGAAAGATGGTGAACTATGCCTGAGCAGGGC 797214 Query 605 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCA 664 |||||||||||||||||||||||||||||| || || ||| ||||||||||| | || Sbjct 797215 GAAGCCAGAGGAAACTCTGGTGGAGGCTCGTAGATGTGCTGACGTGCAAATCGCTTTTCG 797274 Query 665 AATTTGGGTATAGGGGCGA 683 | |||||||||||||||| Sbjct 797275 GACTTGGGTATAGGGGCGA 797293 Score = 168 bits (186), Expect = 3e-39 Identities = 141/173 (82%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 511 TGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGG 570 ||||||||| ||||| | |||| | | || | ||||||| |||||| ||||| | Sbjct 41140 TGCACCATCAACCGACCATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATGTTTGTTGTG 41199 Query 571 ACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||| Sbjct 41200 ACCCGAAAGATGGTGAACTATGCCTGAGCAGGGCGAAGCCAGGGGAAACTCTGGTGGAGG 41259 Query 631 CTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 |||| || || ||| ||||||||||| | || | |||||||||||||||| Sbjct 41260 CTCGTAGATGTGCTGACGTGCAAATCGCTTTTCGGACTTGGGTATAGGGGCGA 41312 Score = 158 bits (174), Expect = 5e-36 Identities = 129/157 (82%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || || ||||||| | ||||| ||||||| Sbjct 796443 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAAGGCTAAAT 796502 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || ||| ||||||||||||| ||||||| |||| ||||||||||||| |||||| || Sbjct 796503 ATCGGCGGGAGACCGATAGCGAACAAGTACCGTGAGGGAAAGATGAAAAGAACTTTGAAA 796562 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||| |||||| | |||||||||||| ||||| Sbjct 796563 AGAGAGCCAAAAAGTGCTTGAAATTGTTGAGGGGGAA 796599 Score = 149 bits (164), Expect = 3e-33 Identities = 127/157 (81%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| |||||||||||||||||| | || || ||||||| | ||||| ||||||| Sbjct 40512 GAGTCGGGTTGTTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAAGGCTAAAT 40571 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 | || |||||||||||| ||||||| || | ||||||||||||| |||||| || Sbjct 40572 ACAGGTGGGAGACCGATAGCATACAAGTACCGTAAGGGAAAGATGAAAAGAACTTTGAAA 40631 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 ||||||| |||||| | |||||||||||| |||||| Sbjct 40632 AGAGAGTCAAAAAGTGCTTGAAATTGTTGAGAGGGAA 40668 Score = 129 bits (142), Expect = 2e-27 Identities = 199/279 (71%), Gaps = 19/279 (7%) Strand=Plus/Plus Query 409 CCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAACCC 468 |||||||| ||||||| ||| |||| ||||| ||||||| ||||| ||||||| Sbjct 51543 CCGTCTTGAAACACGGCCCAGTGAGTACAACATGCATGCGAGCTGGCGGGTGGCAAACCC 51602 Query 469 -GTGCGCGTAATGAAAGTGAACGGAGGTGGGA--AC-CCGTGAGGGTGCACCATCGACCG 524 || ||| || | || || | |||||| || ||| | ||||||||| |||| Sbjct 51603 CGTAAGCGCAAAGGAACCTGAC--AAGTGGGATGACTCCG---GCCTGCACCATCTACCG 51657 Query 525 ATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGT 584 | |||| | | || | ||||||| |||||| ||||| ||||||||||||||| Sbjct 51658 ACAATGATCTTCTGTGAAAGGTTTGAGTGCGAGCATGTTTGTTGTGACCCGAAAGATGGT 51717 Query 585 GAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCT 644 ||| ||||| ||| ||||| || ||||||||| |||||||| || || || Sbjct 51718 GAATTATGC--GAA--------AGCCACGGGGAACTCTGGTTGAGGCTCGTAGATGTGCT 51767 Query 645 GGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | |||||| |||| | || | |||||||||||||||| Sbjct 51768 GACGTGCACATCGCTTTTCTGACTTGGGTATAGGGGCGA 51806 Score = 113 bits (124), Expect = 2e-22 Identities = 123/161 (76%), Gaps = 7/161 (4%) Strand=Plus/Plus Query 34 TTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATG--GGAGGTAAATTTCTTCTAA 91 |||| |||||| |||| |||||||| |||| | |||| || ||||||| | ||||| Sbjct 51172 TTCGCAGAGTCGGGTTGGTTGGGAATCCAGCCC--AATGCAGGTGGTAAATCCCATCTAA 51229 Query 92 AGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCA 151 ||||| ||| ||| ||||||||| ||| ||||||| |||| ||||||||||||| | Sbjct 51230 GGCTAAGTATGGGCGGGAGACCGATGGCGAACAAGTACCGTGAAGGAAAGATGAAAAGAA 51289 Query 152 ---CTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGA 189 ||||| ||| |||| ||||| |||||||||||| Sbjct 51290 GAGCTTTGAAAAAGGAGTCAAAAAATGATTGAAATTGTTGA 51330 Score = 75.2 bits (82), Expect = 5e-11 Identities = 66/81 (81%), Gaps = 1/81 (1%) Strand=Plus/Plus Query 408 CCCGTCTTGGAACACGGACCAAGGAGTCTAACATCTATGCGAGTGTTTGGGTGTCAAA-C 466 ||||||||| ||||||||||||||||| ||||| |||||||| ||||| |||| | Sbjct 40990 CCCGTCTTGAAACACGGACCAAGGAGTACAACATGCATGCGAGTTGGCGGGTGGCAAACC 41049 Query 467 CCGTGCGCGTAATGAAAGTGA 487 |||| ||| ||||||| ||| Sbjct 41050 CCGTAAGCGCAATGAAATTGA 41070 >seq1155 Length=6983 Score = 122 bits (134), Expect = 4e-25 Identities = 124/157 (79%), Gaps = 6/157 (4%) Strand=Plus/Minus Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99 |||||| ||| ||||||||||||| | || || ||||||| | ||||| ||||||| Sbjct 1211 GAGTCGGGTTTGTTGGGAATGCAGCCCAAAGCAGGTGGTAAATCCCATCTAA-GCTAAAT 1153 Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159 || ||| ||||||||||||| ||||||| |||| | ||||||||||| |||||| || Sbjct 1152 ATCGGCGGGAGACCGATAGCGAACAAGTACCGTGA-GGGAAGATGAAAAGAACTTTGAAA 1094 Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 |||||| |||| | |||||||||||| ||||| Sbjct 1093 AGAGAG---CAAAG-GCTTGAAATTGTTGAGGGGGAA 1061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079940991050