Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq763 77.0 1e-12 seq686 77.0 1e-12 seq141 77.0 1e-12 seq65 77.0 1e-12 seq40 77.0 1e-12 seq20 77.0 1e-12 seq1 77.0 1e-12 >seq763 Length=21608 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||| Sbjct 11368 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAACAGCCCA 11312 >seq686 Length=35560 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||| Sbjct 6478 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAACAGCCCA 6422 >seq141 Length=398432 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||| Sbjct 390051 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAACAGCCCA 390107 >seq65 Length=559413 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||| Sbjct 116249 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAACAGCCCA 116193 >seq40 Length=674714 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||| Sbjct 176480 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAACAGCCCA 176424 >seq20 Length=848245 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||| Sbjct 384545 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACCGGGAACAGCCCA 384601 >seq1 Length=1870169 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||||||||||||| |||| ||||||| |||| ||||| |||||| Sbjct 796236 GGAAAAGAAACTAACCAGGATTCCCCTAGTAGCGGCGAGCGAACTGGGAATAGCCCA 796292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230394057840