Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq63 113 1e-22 >seq63 Length=564188 Score = 113 bits (124), Expect = 1e-22 Identities = 135/181 (75%), Gaps = 12/181 (7%) Strand=Plus/Minus Query 57 GCATGTGGTTTAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTGACATC-CTCTGAC 115 || |||||||||||||||| ||||||| | |||||||||| ||||||| |||| Sbjct 164580 GCCTGTGGTTTAATTCGAAACAACGCGCAAAACCTTACCAGTCCTTGACAAGACTCT--- 164524 Query 116 CCCTCTAGAGA------TAGAGGTTTCCCCTTCG--GGGGACAGAGTGACAGGTGATGCA 167 | || ||||| | | || ||| | | | | ||||| ||||||| |||| Sbjct 164523 CTCTTCAGAGAATTCCCTCTCGTTTACCCGGGAGATGTGAAAAGAGTCACAGGTGTTGCA 164464 Query 168 TGGTTGTCGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCT 227 ||| |||||||||||||||||||||||||| |||| | ||| ||||||||||||||| Sbjct 164463 TGGCTGTCGTCAGCTCGTGTCGTGAGATGTCTGGTTCATTCCTTTAACGAGCGCAACCCT 164404 Query 228 T 228 | Sbjct 164403 T 164403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503958624960