Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq763 71.6 8e-11 seq686 71.6 8e-11 seq141 71.6 8e-11 seq65 71.6 8e-11 seq40 71.6 8e-11 seq20 71.6 8e-11 seq1 71.6 8e-11 >seq763 Length=21608 Score = 71.6 bits (78), Expect = 8e-11 Identities = 51/56 (91%), Gaps = 2/56 (4%) Strand=Plus/Plus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 12184 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 12237 >seq686 Length=35560 Score = 71.6 bits (78), Expect = 8e-11 Identities = 51/56 (91%), Gaps = 2/56 (4%) Strand=Plus/Plus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 7295 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 7348 >seq141 Length=398432 Score = 71.6 bits (78), Expect = 8e-11 Identities = 51/56 (91%), Gaps = 2/56 (4%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 389234 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 389181 >seq65 Length=559413 Score = 71.6 bits (78), Expect = 8e-11 Identities = 51/56 (91%), Gaps = 2/56 (4%) Strand=Plus/Plus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 117122 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 117175 >seq40 Length=674714 Score = 71.6 bits (78), Expect = 8e-11 Identities = 51/56 (91%), Gaps = 2/56 (4%) Strand=Plus/Plus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 177297 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 177350 >seq20 Length=848245 Score = 71.6 bits (78), Expect = 8e-11 Identities = 51/56 (91%), Gaps = 2/56 (4%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 383728 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 383675 >seq1 Length=1870169 Score = 71.6 bits (78), Expect = 8e-11 Identities = 51/56 (91%), Gaps = 2/56 (4%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 39430 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 39377 Score = 71.6 bits (78), Expect = 8e-11 Identities = 51/56 (91%), Gaps = 2/56 (4%) Strand=Plus/Minus Query 64 CATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACGTAATACAACGC 119 || ||||||| | ||||||||||| |||||||||||||||||||||||| |||||| Sbjct 795417 CAATCGGTAGGA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACGTAAT-CAACGC 795364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300792242180