Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq831 86.0 7e-15 seq763 86.0 7e-15 seq735 86.0 7e-15 seq686 86.0 7e-15 seq234 86.0 7e-15 seq141 86.0 7e-15 seq121 86.0 7e-15 seq65 86.0 7e-15 seq40 86.0 7e-15 seq20 86.0 7e-15 seq1 86.0 7e-15 seq1155 75.2 1e-11 >seq831 Length=15331 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 14329 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 14272 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 14271 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 14236 >seq763 Length=21608 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 13003 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 13060 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 13061 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 13096 >seq735 Length=27027 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 25924 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 25867 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 25866 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 25831 >seq686 Length=35560 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 8114 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 8171 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 8172 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 8207 >seq234 Length=270149 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 55548 ACCAACAAGATAGGCCAGA--GTCCTATCACGTTATTCCATGCTAACATATTCAGAGCGT 55605 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 55606 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 55641 >seq141 Length=398432 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 388415 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 388358 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 388357 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 388322 >seq121 Length=427588 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 414894 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACCTATTCAGAGCGT 414951 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 414952 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 414987 >seq65 Length=559413 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 117941 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 117998 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 117999 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 118034 >seq40 Length=674714 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 178116 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 178173 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 178174 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 178209 >seq20 Length=848245 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 382909 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 382852 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 382851 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 382816 >seq1 Length=1870169 Score = 86.0 bits (94), Expect = 7e-15 Identities = 78/96 (81%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 794598 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 794541 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||||||||||||||||||||| ||||| |||| Sbjct 794540 AGGCCTGCTTTGAACACTCTAATTTACTCAAAGTAA 794505 Score = 82.4 bits (90), Expect = 9e-14 Identities = 77/96 (80%), Gaps = 3/96 (3%) Strand=Plus/Minus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGG-GCGT 70 |||||||| ||||| | ||||||| |||||||||||||| ||||| | |||| Sbjct 38611 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATTCAGAGCGT 38554 Query 71 AAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 | ||||| ||||||||||||||||| ||||| |||| Sbjct 38553 AGGCCTGGTTTGAACACTCTAATTTACTCAAAGTAA 38518 >seq1155 Length=6983 Score = 75.2 bits (82), Expect = 1e-11 Identities = 75/95 (79%), Gaps = 3/95 (3%) Strand=Plus/Plus Query 12 ACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCGTA 71 |||||||| ||||| | ||||||| |||||||||||||| ||| | ||||| Sbjct 2989 ACCAACAAGATAGGCCAGA--GTCCTATCGCGTTATTCCATGCTAACATATCAGAGCGTA 3046 Query 72 AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAA 106 |||||||||||||||||||| || ||||| |||| Sbjct 3047 GGCCTGCTTTGAACACTCTAA-TTACTCAAAGTAA 3080 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595184137734