Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq357 129 1e-27 >seq357 Length=166735 Score = 129 bits (142), Expect = 1e-27 Identities = 182/253 (72%), Gaps = 2/253 (1%) Strand=Plus/Minus Query 6 GCTTTCGCGCCTCAGCGTCAGTTACTGTCCAGCAATCCGCCTTCGCCACTGGTGTTCCTC 65 ||||||| |||| |||||| | |||||| || ||||||| |||||||| || Sbjct 77959 GCTTTCGTCTTTCAGTGTCAGTATTGGCCCAGCAGAGTGCTTTCGCCATTGGTGTTCTTC 77900 Query 66 CGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCACTCAAG 125 | || |||| ||||||||||||||||| |||||||| |||| || | |||| || Sbjct 77899 CCGATCTCTATGCATTTCACCGCTACACCGGGAATTCCCTCTGCCCCTACCATACTCTAG 77840 Query 126 AAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGACTTGCCT 185 |||||| | ||| ||||| ||||| ||| ||| |||||| | Sbjct 77839 CCTGCTAGTTTCCATCGCATCTCCAGGGTTAAGCCCTGCTATTTTACAGAAGACTTGGCA 77780 Query 186 TCCCGCCTACACGCC-CTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATT 244 || ||| || | | |||||| ||||||||||||||||||||||||| ||| ||||| Sbjct 77779 GGCCACCT-CAGGACGCTTTACGCCCAATAAATCCGGATAACGCTTGCATCCTCTGTATT 77721 Query 245 ACCGCGGCTGCTG 257 ||||||||||||| Sbjct 77720 ACCGCGGCTGCTG 77708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828777912221