Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_031922.1 Length=174830 Score E Sequences producing significant alignments: (Bits) Value seq53 82.4 9e-11 >seq53 Length=604443 Score = 82.4 bits (90), Expect = 9e-11 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 160815 GAAGCTGCATCTCTTGATGAATGGCTCTACAATGGTGGTCCTTACCAACTGGTCGTATTT 160874 |||||| | ||||||||||||||||| |||||| |||||||||||||||| ||||| | | Sbjct 112775 GAAGCTTCTTCTCTTGATGAATGGCTTTACAATAGTGGTCCTTACCAACTAGTCGTTTGT 112834 Query 160875 CAC 160877 ||| Sbjct 112835 CAC 112837 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 559308766108400