Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Botryococcus_20braunii_20[genbank_20GCA_5F002005505.1_202017-02-22] 2,751 sequences; 184,381,702 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq245 91.5 6e-13 >seq245 Length=258527 Score = 91.5 bits (100), Expect = 6e-13 Identities = 108/144 (75%), Gaps = 2/144 (1%) Strand=Plus/Minus Query 364424 CCAATAGTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCG 364483 ||||| ||||| || |||||||||| ||||||||||||| | || ||||| ||||| Sbjct 233631 CCAATGGTCATGCGCGAGGGAATGGCATGAGGGTTGATGATAAGATCGGGCACAATGCCC 233572 Query 364484 TCAGCGGTAAAGGGCATATCTTCGGGAG-GAACGATGAGACCAATGGTTCCCTTTTGCGC 364542 ||||| || | ||||| || || ||| | ||| ||| ||| ||||||||||| || | Sbjct 233571 TCAGCTGTCCAAGGCATGTCCTCCTGAGTGTACG-TGATACCGATGGTTCCCTTCTGACC 233513 Query 364543 ATAGCGAGAAGCAAACTTGTCGCC 364566 || || ||||| ||||| || Sbjct 233512 ATGCCGGCTGGCAAATTTGTCCCC 233489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884819963055643