Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq1367 219 1e-54 >seq1367 Length=6375 Score = 219 bits (242), Expect = 1e-54 Identities = 295/407 (72%), Gaps = 8/407 (2%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 ||||||| |||||||| |||||||||| |||||||||||||||||||||||| ||| || Sbjct 1095 TACCTGAGGAATAAGCTCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAGGGGAGC 1154 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| ||| ||| | ||| Sbjct 1155 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGTCCAAAAAGTCTAATGT 1214 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTG-ACTGCACGACTAGAGTGTGTCAG 181 |||||| |||| |||| | ||||| | | ||| |||||||||| | || Sbjct 1215 CAAATCCATTGGCTCAACCAAAGGCAGGCATTGGAGTACTATTGGACTAGAGTGCGGAAG 1274 Query 182 AGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAATG 241 ||| | ||||| || | ||| |||||||||| |||||| | || |||||||| | Sbjct 1275 AGGTAGAGGGAATCCCTAGCGTAACAGTGAAATGTGTAGATTTTAGGGAGAACACCAGCG 1334 Query 242 GCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAACA 301 |||||||| | ||||| | |||||| || | |||||||| |||||| || | Sbjct 1335 GCGAAGGCGCTCTACTGGGCCGAGACTGACACTGAGAGACGAAAGCTACGGGAGCGAATA 1394 Query 302 GGATTAGATACCCTGGTAGTCCACGCCCTAAACGATATCAACTAGTTGTTGGGGATTTAC 361 |||||||||||||| |||||| || |||||||| |||| || ||||| || Sbjct 1395 GGATTAGATACCCTAGTAGTCGTAGCTGTAAACGATGGAGACTA--AGTAGGGGA--TAA 1450 Query 362 TTCCTTGGTAACGTAGCTAACGCGTGAAGTTGACCGCCTGGGGAATA 408 || | | ||||||||||| | |||| ||||||||||| || Sbjct 1451 CCCCCCGCT---GTAGCTAACGCATTAAGTCTCCCGCCTGGGGAGTA 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289567334432