Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq1576 322 8e-86 >seq1576 Length=4472 Score = 322 bits (356), Expect = 8e-86 Identities = 225/256 (88%), Gaps = 0/256 (0%) Strand=Plus/Plus Query 3 CTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 62 |||| || | ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2273 CTCGTTGAATGCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGAC 2332 Query 63 CTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCA 122 ||||||| |||||| ||||||||||||| | ||||||||||||||||||||| ||| || Sbjct 2333 CTGTTATCGCCTCACACTTCCATTGGCTAAACGCCAATAGTCCCTCTAAGAAGTCAGGCA 2392 Query 123 CCAACCATAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAAC 182 | ||| || || | | |||||||||||| | ||||||||||||||| |||||| ||| Sbjct 2393 TCCACCGAGGTGGACGTGACTATTTAGCAGGCTGAGGTCTCGTTCGTTACCGGAATCAAC 2452 Query 183 CAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAA 242 | ||||| || |||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 2453 CTGACAAGGCAACCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAA 2512 Query 243 GAGCTATCAATCTGTC 258 ||||| |||||||||| Sbjct 2513 GAGCTCTCAATCTGTC 2528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796780447773