Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq1367 206 5e-51 >seq1367 Length=6375 Score = 206 bits (228), Expect = 5e-51 Identities = 182/227 (80%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 113 GACAGTGTCAGTCGGGCAGTTTGACTGGGGCGGTCGCCTCCCAAAGAGTAACGGAGGCGC 172 |||| | |||| ||||||||| ||||||||| |||||| |||| |||||||||| | Sbjct 5190 GACATTTTCAGGTGGGCAGTTTATCTGGGGCGGATGCCTCCTAAAGTGTAACGGAGGTGT 5249 Query 173 CCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACAGTGCAAAGGCAAAAGGGTGTT 232 ||| | | |||||||| |||| ||||| || || |||| ||||||||||||| | | Sbjct 5250 GCAACGGTTCCCTCAGCCTGGACGGAAATCAGGCCTTGAGTGTAAAGGCAAAAGGGAGCT 5309 Query 233 TGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCGGGCTTAATGATCCGGCGGTGC 292 ||||||| | ||| |||||| ||||||| |||||| ||| |||| ||||||| |||||| Sbjct 5310 TGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCGGCCTTAGTGATCCGACGGTGC 5369 Query 293 TGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCCTGGGGATA 339 | ||||| ||||||||||| ||||||||||| ||| || |||||| Sbjct 5370 CGCGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTCTAGGGATA 5416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982375115808