Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= AAMG01001821.1 Length=161 Score E Sequences producing significant alignments: (Bits) Value seq1367 86.0 5e-15 >seq1367 Length=6375 Score = 86.0 bits (94), Expect = 5e-15 Identities = 111/153 (73%), Gaps = 8/153 (5%) Strand=Plus/Minus Query 2 CGAGTTGCAGACTACAATCCGGACTACGATACACTTTCTGGGATTAGCTCCCCCTCGCGG 61 |||||||||| || ||||||| ||| | | | ||| |||| || ||||||||| Sbjct 1921 CGAGTTGCAGCCTGCAATCCGAACTGAGGTTGAGTTTAGCAGATTTGCGTGCCCTCGCGG 1862 Query 62 GTTGGCGGCCCTCTGTATGT----ACCATTGTATGACGTGTGAAGCCCTACCCATAAGGG 117 ||| || |||| ||| |||||||||| ||||||| |||| |||||| Sbjct 1861 GTTAGCT----TCTGATTGTCCCAACCATTGTATTACGTGTGTGGCCCAGGGTGTAAGGG 1806 Query 118 CCATGAGGACTTGACGTCATCCCCACCTTCCTC 150 |||| ||||||||||||||| |||||||||| Sbjct 1805 GCATGCTGACTTGACGTCATCCTCACCTTCCTC 1773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 415989792010