Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1367 269 6e-70 >seq1367 Length=6375 Score = 269 bits (298), Expect = 6e-70 Identities = 307/409 (75%), Gaps = 10/409 (2%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGC 60 ||| |||||| |||| |||||||||| |||||||||||||||||||||||| ||| || Sbjct 1095 TACCTGAGGAATAAGCTCCGGCTAACTTCGTGCCAGCAGCCGCGGTAATACGAGGGGAGC 1154 Query 61 TAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGT 120 ||||||||||||||| | ||||||||||| || ||||||||| ||||| | || Sbjct 1155 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGTCCAAAAAGTCTAATGT 1214 Query 121 GAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAA-ACTGCAGGGCTAGAGTGCAGGAG 179 ||| | |||||||||| || || || || ||| || ||||||||| | || Sbjct 1215 CAAATCCATTGGCTCAACCAAAGGCAGGCATTGGAGTACTATTGGACTAGAGTGCGGAAG 1274 Query 180 GGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAGTG 239 || | ||||| ||||| ||| | |||||||| |||||| ||||| ||||||||| | Sbjct 1275 AGGTAGAGGGAATCCCTAGCGTAACAGTGAAATGTGTAGATTTTAGGGAGAACACCAGCG 1334 Query 240 GCGAAGGCGGCTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACA 299 ||||||||| | |||| | | |||||||||||| ||||||| |||||| || | Sbjct 1335 GCGAAGGCGCTCTACTGGGCCGAGACTGACACTGAGAGACGAAAGCTACGGGAGCGAATA 1394 Query 300 GGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGAATACTAGGTGTCGGGGCGCATA 359 |||||||||||||| |||||| || |||||||||| | |||| || |||| ||| Sbjct 1395 GGATTAGATACCCTAGTAGTCGTAGCTGTAAACGATGGAGACTA--AGTAGGGG---ATA 1449 Query 360 AGTGCTCCGGTGCCGCAGCAAACGCAATAAGTATTCCACCTGGGGAGTA 408 | || || | ||| |||||| ||||| | || ||||||||||| Sbjct 1450 A----CCCCCCGCTGTAGCTAACGCATTAAGTCTCCCGCCTGGGGAGTA 1494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203169522944