Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq1576 338 1e-90 >seq1576 Length=4472 Score = 338 bits (374), Expect = 1e-90 Identities = 263/310 (85%), Gaps = 4/310 (1%) Strand=Plus/Minus Query 20 GAGCGAGACCTTAACCTGCTAAATAGCCAGGCCCGCTTTGGCGGGTCGCCGGCTTCTTAG 79 || |||||||| | |||||||||||| || | || | | || || | | | |||||||| Sbjct 2437 GAACGAGACCTCAGCCTGCTAAATAGTCACGTCCACCTCGGTGGATGCCTGACTTCTTAG 2378 Query 80 AGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTT 138 ||||||||| ||| | |||| |||||||| |||||| |||||||||||||||||||||| Sbjct 2377 AGGGACTATTGGCGTTTAGCCAATGGAAGTGTGAGGCGATAACAGGTCTGTGATGCCCTT 2318 Query 139 AGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCACCTTGGCC 198 ||||||||||||||||||||||||||||||||| | ||||||| ||| ||||||| Sbjct 2317 AGATGTTCTGGGCCGCACGCGCGCTACACTGACGCATTCAACGAGCCTATC--CTTGGCC 2260 Query 199 GGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTGCAATTATT 258 | ||||| |||||||||| | ||||| |||||| |||||||||| |||||||||||| Sbjct 2259 GAGAGGTCCGGGTAATCTT-TGAAACTGCGTCGTGATGGGGATAGATTATTGCAATTATT 2201 Query 259 GCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATTACGTCCCT 318 |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| Sbjct 2200 AGTCTTCAACGAGGAATGCCTAGTAAGCGCAAGTCATCAGCTTGCGTTGATTACGTCCCT 2141 Query 319 GCCCTTTGTA 328 |||||||||| Sbjct 2140 GCCCTTTGTA 2131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947176007424