Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq1904 91.5 2e-16 >seq1904 Length=2618 Score = 91.5 bits (100), Expect = 2e-16 Identities = 95/121 (79%), Gaps = 3/121 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | | |||| |||||||| | ||| || |||| || || | Sbjct 1087 GTACGAGAGGAACCGCCGGGT-CAGA-TAATTGGTAAT-GCGCTTGGCTGAAAAGCCAAT 1031 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCA 120 | ||| |||||| ||||||| | | ||| ||||||||||||||||||||| ||||| | Sbjct 1030 GGCGCAAAGCTAACATCTGCAGTCTAATGACTGAACGCCTCTAAGTCAGAAGACATGCTA 971 Query 121 G 121 | Sbjct 970 G 970 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819179898112