Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20applanata_20[genbank_20GCA_5F001662365.1_202016-04- 26] 2,533 sequences; 78,504,178 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq1576 636 5e-180 seq695 185 3e-44 >seq1576 Length=4472 Score = 636 bits (704), Expect = 5e-180 Identities = 448/506 (89%), Gaps = 7/506 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| |||| |||| |||| |||| |||||||||||||||||| Sbjct 3241 GTACTCATTCCAATTACCAGAC--AAAAATGCCCGGTATTGTTATTTATTGTCACTACCT 3298 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3299 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 3358 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||| | |||| ||||||| ||||||||| Sbjct 3359 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATCCTCCGTCACCCGTTACCACCATGGTA 3418 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 3419 GGCCTCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAAACATCGCCGGCA 3478 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC-GTTGG 299 ||||||| |||||||||| ||||||| |||| || || | | | ||| | | ||| Sbjct 3479 CAAGGCCGTGCGATTCGTGAAGTTATCATGATTCGCCTAAGGTCGGGCAAGCCCGGCTGG 3538 Query 300 TTTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGGTTTTTAGCATGTATTAGCTCT 358 ||||||||||||||||| ||||||| |||||| ||| ||| ||| ||||||||||| Sbjct 3539 CCTTTTATCTAATAAATACGTCCCTTCCAGAAGTC-GGGATTTACGCACGTATTAGCTCT 3597 Query 359 AGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAAT 418 |||||||| |||||||||| ||| ||||||| ||||||||||| |||||||||||||| Sbjct 3598 AGAATTACTACGGTTATCCGAGTA--AAGGTACCATCAAATAAACTATAACTGATTTAAT 3655 Query 419 GAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTT 478 ||||||||||||||||||| ||||| | ||||||||||||||||||||||||||||| Sbjct 3656 GAGCCATTCGCAGTTTCACAGTATAAGCAGTTTATACTTAGACATGCATGGCTTAATCTT 3715 Query 479 TGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||||||| Sbjct 3716 TGAGACAAGCATATGACTACTGGCAG 3741 >seq695 Length=26675 Score = 185 bits (204), Expect = 3e-44 Identities = 122/134 (91%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 371 GTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCA 430 ||||||| ||| ||||||| ||||||||||| |||||||||||||||||||||||||| Sbjct 16038 GTTATCCGAGTA--AAGGTACCATCAAATAAACTATAACTGATTTAATGAGCCATTCGCA 15981 Query 431 GTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCAT 490 ||||||| ||||| | ||||||||||||||||||||||||||||||||||||||||| Sbjct 15980 GTTTCACAGTATAAGCAGTTTATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCAT 15921 Query 491 ATGACTACTGGCAG 504 |||||||||||||| Sbjct 15920 ATGACTACTGGCAG 15907 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510361741568