Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01000140.1
Length=336
Score E
Sequences producing significant alignments: (Bits) Value
seq2624 107 4e-21
>seq2624
Length=3676
Score = 107 bits (118), Expect = 4e-21
Identities = 221/324 (68%), Gaps = 11/324 (3%)
Strand=Plus/Minus
Query 12 ggggggTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGG 71
|||| |||||||||| | |||| || | || | ||||| || | || || |
Sbjct 3525 GGGGAGTGAAATAGAACATGAAACCATGTGCTTGCAAGCAGTGGAAGGGTTAAGAGCC-- 3468
Query 72 TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGG 131
|||| |||||||| ||| | |||||||| ||| ||| | | | || ||||||||
Sbjct 3467 TGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTA-TAGGAAGTGGCTGGGTTAAGGA 3409
Query 132 CTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC- 190
|||| || ||||| ||| ||||||||| || || |||||| | |||| |
Sbjct 3408 ATTCAATCCG--TAGCCCAAGCGAAAGCGAGTCTGAATAGGGCGTAAA--TGGTCACTTC 3353
Query 191 ---TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247
| ||| |||| || |||||||| || || |||||||||| ||||| |
Sbjct 3352 TTATGGACCCGAACCCGGGTGATCTATTCATGACCAGGTTGAAGCTTTTGTAACACTAAG 3293
Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307
||||||||||||||| | |||||||| | ||||||| | | | |||||| ||||
Sbjct 3292 TGGAGGACCGAACCGACCGATGTTGAAAAATCGGCGGATGAGTTGTGAATAGGGGAGAAA 3233
Query 308 GGCCAATCAAACTGGGAAATAGCT 331
|||||| |||| ||| |||||
Sbjct 3232 TTCCAATCGAACTCGGAGCTAGCT 3209
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 972760095744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |