Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq2680 286 5e-75
seq146 84.2 3e-14
>seq2680
Length=3449
Score = 286 bits (316), Expect = 5e-75
Identities = 220/256 (86%), Gaps = 5/256 (2%)
Strand=Plus/Plus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
|||||||||||||||||||| |||||||| ||| |||||| ||||||||||||| ||| |
Sbjct 2197 GTACAAAGGGCAGGGACGTAATCAACGCGTGCT-GATGACACGCGCTTACTAGGCATT-C 2254
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTA 120
|||||||||||| || ||||||||| ||||||||||||||||| | ||| |||||||
Sbjct 2255 CTCGTTGAAGACTAATAATTGCAATAATCTATCCCCATCACGACGCGGTTTACAAGATTA 2314
Query 121 CCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGG 180
||||| ||| |||||||||| | || |||||||| | ||||||||||||||||||||
Sbjct 2315 CCCGGGCCTCTCGGCCAAGG--ACAGGCTCGTTGATCGCGTCAGTGTAGCGCGCGTGCGG 2372
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||| |||||| |||||| | | ||||| |
Sbjct 2373 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTAAACG 2432
Query 241 GCCAT-CTCCCTCGAA 255
| || |||||| ||
Sbjct 2433 CCAATAGTCCCTCTAA 2448
>seq146
Length=190748
Score = 84.2 bits (92), Expect = 3e-14
Identities = 65/76 (86%), Gaps = 1/76 (1%)
Strand=Plus/Plus
Query 181 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAAG 240
|||||||||||||||||||||||||||||||||| |||||| |||||| | | ||||| |
Sbjct 64751 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTAAACG 64810
Query 241 GCCAT-CTCCCTCGAA 255
| || |||||| ||
Sbjct 64811 CCAATAGTCCCTCTAA 64826
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751970116930
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |