Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= AAMG01000383.1 Length=435 Score E Sequences producing significant alignments: (Bits) Value seq2866 214 5e-53 >seq2866 Length=2748 Score = 214 bits (236), Expect = 5e-53 Identities = 243/322 (75%), Gaps = 3/322 (1%) Strand=Plus/Plus Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62 || |||| |||||||| |||||||||| |||||||||||||||||||||| |||| || Sbjct 1270 TATCTGATGAATAAGCTCCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGAGC 1329 Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122 |||||||| |||||| | |||||||||||||| | ||| || | ||| | ||| Sbjct 1330 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTTTGTAGGTGGCTCGTAAAGTCTACTGT 1389 Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTG-ACTGCACGA-CTAGAGTGTGTCA 180 |||| | |||| ||||| | ||| | | | ||| ||||| || ||||||| | Sbjct 1390 CAAATATCGAGGCTCAACCTCGAGCAGGCAGTGGAGTACT-CACGAGCTTGAGTGTGGTA 1448 Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240 |||| | ||||||||| ||| ||| |||||||||||||| || |||| |||||||| Sbjct 1449 GAGGTAGAGGGAATTCCATGTGGAGCGGTGAAATGCGTAGAGATATGGAAGAACACCAGC 1508 Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300 ||||||||| | ||||| || |||||| || | |||||||| ||||| || Sbjct 1509 GGCGAAGGCGCTCTACTGGGCCAAGACTGACACTGAGAAACGAAAGCTAAGGGAGTGAAT 1568 Query 301 AGGATTAGATACCCTGGTAGTC 322 ||||||||||||||| ||| || Sbjct 1569 AGGATTAGATACCCTAGTAATC 1590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1289547100608