Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01000383.1
Length=435
Score E
Sequences producing significant alignments: (Bits) Value
seq2866 214 5e-53
>seq2866
Length=2748
Score = 214 bits (236), Expect = 5e-53
Identities = 243/322 (75%), Gaps = 3/322 (1%)
Strand=Plus/Plus
Query 3 TACCTGAAGAATAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGC 62
|| |||| |||||||| |||||||||| |||||||||||||||||||||| |||| ||
Sbjct 1270 TATCTGATGAATAAGCTCCGGCTAACTCTGTGCCAGCAGCCGCGGTAATACAGAGGGAGC 1329
Query 63 AAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGACAGGTGT 122
|||||||| |||||| | |||||||||||||| | ||| || | ||| | |||
Sbjct 1330 AAGCGTTATCCGGAATGATTGGGCGTAAAGCGTTTGTAGGTGGCTCGTAAAGTCTACTGT 1389
Query 123 GAAATCCCCGGGCTTAACCTGGGAATTGCATTTGTG-ACTGCACGA-CTAGAGTGTGTCA 180
|||| | |||| ||||| | ||| | | | ||| ||||| || ||||||| |
Sbjct 1390 CAAATATCGAGGCTCAACCTCGAGCAGGCAGTGGAGTACT-CACGAGCTTGAGTGTGGTA 1448
Query 181 GAGGGGGGTGGAATTCCACGTGTAGCAGTGAAATGCGTAGATATGTGGAGGAACACCAAT 240
|||| | ||||||||| ||| ||| |||||||||||||| || |||| ||||||||
Sbjct 1449 GAGGTAGAGGGAATTCCATGTGGAGCGGTGAAATGCGTAGAGATATGGAAGAACACCAGC 1508
Query 241 GGCGAAGGCAGCCCCCTGGGATAACACTGACGCTCATGCACGAAAGCGTGGGGAGCAAAC 300
||||||||| | ||||| || |||||| || | |||||||| ||||| ||
Sbjct 1509 GGCGAAGGCGCTCTACTGGGCCAAGACTGACACTGAGAAACGAAAGCTAAGGGAGTGAAT 1568
Query 301 AGGATTAGATACCCTGGTAGTC 322
||||||||||||||| ||| ||
Sbjct 1569 AGGATTAGATACCCTAGTAATC 1590
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1289547100608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |