Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01000753.1
Length=364
Score E
Sequences producing significant alignments: (Bits) Value
seq2624 322 1e-85
>seq2624
Length=3676
Score = 322 bits (356), Expect = 1e-85
Identities = 293/364 (80%), Gaps = 8/364 (2%)
Strand=Plus/Plus
Query 7 GCATCTTCACCGGGATTA--CAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64
|||||||||| |||| | | ||||||||||| || | ||||||| ||||| ||||
Sbjct 1982 GCATCTTCAC-GGGACAAGTCTATTTCACCGAGCCTCTCTCCGAGACAGCGCCCAGATCG 2040
Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124
||||||||||||||| ||||| ||||||| |||||| |||||||||||||||||||||||
Sbjct 2041 TTACGCCTTTCGTGCAGGTCGAAACTTACTCGACAATGAATTTCGCTACCTTAGGACCGT 2100
Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT--TGCTC--TAAC 180
||||||||||||||||||| || ||||||| || | |||| | ||| ||||
Sbjct 2101 TATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTTTTTCTTGCGAAATAAC 2160
Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240
| |||||||||||| |||| |||||||||||||| || ||| | ||||| |||||
Sbjct 2161 CAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATTTTGTCTTTCGACT 2220
Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300
| || || ||||||||||||||||||||||||| ||||||| || ||||| || | |
Sbjct 2221 TTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGGCCTGGTCACTGCGACCCTTTTT 2280
Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGT 360
||| ||| |||||||| || ||||||||||| || |||||||||||||||| | |||
Sbjct 2281 AGA-GGGCGCCCCTTCTTCCGAAGTTACGGGGCCAGTTTGCCGAGTTCCTTAGAGAGAGT 2339
Query 361 TCTC 364
||||
Sbjct 2340 TCTC 2343
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1062356420352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |