Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq2624 322 1e-85 >seq2624 Length=3676 Score = 322 bits (356), Expect = 1e-85 Identities = 293/364 (80%), Gaps = 8/364 (2%) Strand=Plus/Plus Query 7 GCATCTTCACCGGGATTA--CAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||||||||| |||| | | ||||||||||| || | ||||||| ||||| |||| Sbjct 1982 GCATCTTCAC-GGGACAAGTCTATTTCACCGAGCCTCTCTCCGAGACAGCGCCCAGATCG 2040 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 ||||||||||||||| ||||| ||||||| |||||| ||||||||||||||||||||||| Sbjct 2041 TTACGCCTTTCGTGCAGGTCGAAACTTACTCGACAATGAATTTCGCTACCTTAGGACCGT 2100 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGTTCACTGCTTCGAT--TGCTC--TAAC 180 ||||||||||||||||||| || ||||||| || | |||| | ||| |||| Sbjct 2101 TATAGTTACGGCCGCCGTTCACCGGGGCTTCGGTCGTCAGCTTTTTTCTTGCGAAATAAC 2160 Query 181 AGATCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACT 240 | |||||||||||| |||| |||||||||||||| || ||| | ||||| ||||| Sbjct 2161 CAACTTCCTTAACCTTCCGGCACTGGGCAGGCGTCAGCCCCCATATTTTGTCTTTCGACT 2220 Query 241 TAGCAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCAT 300 | || || ||||||||||||||||||||||||| ||||||| || ||||| || | | Sbjct 2221 TTGCGGAGACCTGTGTTTTTGGTAAACAGTCGCCTGGGCCTGGTCACTGCGACCCTTTTT 2280 Query 301 AGACAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGT 360 ||| ||| |||||||| || ||||||||||| || |||||||||||||||| | ||| Sbjct 2281 AGA-GGGCGCCCCTTCTTCCGAAGTTACGGGGCCAGTTTGCCGAGTTCCTTAGAGAGAGT 2339 Query 361 TCTC 364 |||| Sbjct 2340 TCTC 2343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062356420352