Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq2680 297 3e-78 seq146 257 3e-66 >seq2680 Length=3449 Score = 297 bits (328), Expect = 3e-78 Identities = 215/246 (87%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 14 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 2351 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCC 2410 Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133 ||| ||||||||||||| | ||||||||||||||||||||| | | | || || Sbjct 2411 TCATACTTCCATTGGCTAAACGCCAATAGTCCCTCTAAGAAGTCTG-CGCCCCGCAGGTG 2469 Query 134 CGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192 ||| | | |||||||||||| | ||||||||||||||| |||||| |||| ||||| | Sbjct 2470 CGAGGCTGACTATTTAGCAGGCTGAGGTCTCGTTCGTTACCGGAATCAACCTGACAAGGC 2529 Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252 | |||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| Sbjct 2530 AACCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAAGAGCTCTCAA 2589 Query 253 TCTGTC 258 |||||| Sbjct 2590 TCTGTC 2595 >seq146 Length=190748 Score = 257 bits (284), Expect = 3e-66 Identities = 193/224 (86%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 36 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAG 95 |||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | | Sbjct 64751 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTAAACG 64810 Query 96 CCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG-CTATTTAGCAGGT 154 |||||||||||||||||||| | || || | | ||| | | |||||||||||| Sbjct 64811 CCAATAGTCCCTCTAAGAAGTCTGCGCCCCGCAGGTG-CGAGGCTGACTATTTAGCAGGC 64869 Query 155 TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCC 214 | ||||||||||||||| |||||| |||| ||||| || ||||||||||||||||||| Sbjct 64870 TGAGGTCTCGTTCGTTACCGGAATCAACCTGACAAGGCAACCCACCAACTAAGAACGGCC 64929 Query 215 ATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||||||| ||||||||||||||||| |||||||||| Sbjct 64930 ATGCACCACCACCCACAGAATCAAGAAAGAGCTCTCAATCTGTC 64973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796768336662