Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq2680 297 3e-78
seq146 257 3e-66
>seq2680
Length=3449
Score = 297 bits (328), Expect = 3e-78
Identities = 215/246 (87%), Gaps = 2/246 (1%)
Strand=Plus/Plus
Query 14 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCC 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2351 CGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCC 2410
Query 74 TCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGT 133
||| ||||||||||||| | ||||||||||||||||||||| | | | || ||
Sbjct 2411 TCATACTTCCATTGGCTAAACGCCAATAGTCCCTCTAAGAAGTCTG-CGCCCCGCAGGTG 2469
Query 134 CGATG-GGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATC 192
||| | | |||||||||||| | ||||||||||||||| |||||| |||| ||||| |
Sbjct 2470 CGAGGCTGACTATTTAGCAGGCTGAGGTCTCGTTCGTTACCGGAATCAACCTGACAAGGC 2529
Query 193 ACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAA 252
| |||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||
Sbjct 2530 AACCCACCAACTAAGAACGGCCATGCACCACCACCCACAGAATCAAGAAAGAGCTCTCAA 2589
Query 253 TCTGTC 258
||||||
Sbjct 2590 TCTGTC 2595
>seq146
Length=190748
Score = 257 bits (284), Expect = 3e-66
Identities = 193/224 (86%), Gaps = 2/224 (1%)
Strand=Plus/Plus
Query 36 CCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAG 95
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||| | |
Sbjct 64751 CCCAGAACATCTAAGGGCATCACAGACCTGTTATCGCCTCATACTTCCATTGGCTAAACG 64810
Query 96 CCAATAGTCCCTCTAAGAAGCCAGCCACCAACCATAGTCGATGGGG-CTATTTAGCAGGT 154
|||||||||||||||||||| | || || | | ||| | | ||||||||||||
Sbjct 64811 CCAATAGTCCCTCTAAGAAGTCTGCGCCCCGCAGGTG-CGAGGCTGACTATTTAGCAGGC 64869
Query 155 TAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCC 214
| ||||||||||||||| |||||| |||| ||||| || |||||||||||||||||||
Sbjct 64870 TGAGGTCTCGTTCGTTACCGGAATCAACCTGACAAGGCAACCCACCAACTAAGAACGGCC 64929
Query 215 ATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 64930 ATGCACCACCACCCACAGAATCAAGAAAGAGCTCTCAATCTGTC 64973
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796768336662
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |