Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= AAMG01001083.1 Length=339 Score E Sequences producing significant alignments: (Bits) Value seq2624 178 3e-42 >seq2624 Length=3676 Score = 178 bits (196), Expect = 3e-42 Identities = 152/188 (81%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 152 CCCAAAGAGTAACGGAGGCGCCCAAAGATACCCTCAGCTTGGATGGAAACCATGCGCACA 211 |||||| |||||||||||| ||||| | ||||||| |||| ||||| || | | Sbjct 562 CCCAAAAGGTAACGGAGGCGTGCAAAGGTTCCCTCAGTCTGGACGGAAATCAGACATTGA 503 Query 212 GTGCAAAGGCAAAAGGGTGTTTGACTGCGACACCCTCAAGTCTAGCAGGGACGAAAGTCG 271 ||||||||||||||||| | |||||||| | ||| |||||| ||||||| |||||| || Sbjct 502 GTGCAAAGGCAAAAGGGAGCTTGACTGCAAGACCTACAAGTCGAGCAGGGGCGAAAGCCG 443 Query 272 GGCTTAATGATCCGGCGGTGCTGAATGGAACGGCCGTCGCTCGACGGATAAAAGCTACCC 331 | |||| ||||||| |||||| | ||||| ||||||||||| ||||||||||| ||| | Sbjct 442 GCCTTAGTGATCCGACGGTGCCGCGTGGAAGGGCCGTCGCTCAACGGATAAAAGTTACTC 383 Query 332 TGGGGATA 339 | |||||| Sbjct 382 TAGGGATA 375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982359701952