Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016-
04-26] 4,102 sequences; 141,916,335 total letters
Query= AAMG01001213.1
Length=600
Score E
Sequences producing significant alignments: (Bits) Value
seq2624 282 2e-73
>seq2624
Length=3676
Score = 282 bits (312), Expect = 2e-73
Identities = 349/470 (74%), Gaps = 23/470 (5%)
Strand=Plus/Plus
Query 136 CGCTGCACCTAAATGCATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCA 195
|||||| ||| || |||||||||||||| ||||||| | | |||| |||||| ||||
Sbjct 3178 CGCTGCGCCTCAACGCATTTCGGGGAGATCCAGCTAGCTCCGAGTTCGATTGGAATTTCT 3237
Query 196 CCCCTATCCACAGGTCATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGG 255
||||||| |||| |||||| | | |||||||| | || ||||||||||||||| |
Sbjct 3238 CCCCTATTCACAACTCATCCGCCGATTTTTCAACATCGGTCGGTTCGGTCCTCCACTTAG 3297
Query 256 TCTTACCCGCGCTTCAACCTGCCCATGGATAGATCACTTCGCTTCGGGTC--TTGATCGT 313
| |||| ||||||||||| |||| ||||||||| | |||||||| | ||
Sbjct 3298 TGTTACAAAAGCTTCAACCTGGTCATGAATAGATCACCCGGGTTCGGGTCCATAAGAAGT 3357
Query 314 G-CCACTCATACGCCCTATTCGGACTCGCTTTCGCTACGGCTAC--CCCACACGGGTTAA 370
| ||| | |||||||||||| |||||||||||||| |||||| | ||||
Sbjct 3358 GACCATT--TACGCCCTATTCAGACTCGCTTTCGCTTGGGCTACGGATTGAATTCCTTAA 3415
Query 371 CCTCGCGACACAACGCA-AACTCGCAGGCTCATTCTTCAAAAGGCACGCCGTCACCTGGT 429
|| || ||| | | || |||| |||||||||||||| |||||||| |||| ||
Sbjct 3416 CCCAGC--CACTTCCTATAAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCA---GGC 3470
Query 430 ACCTAAAAGGCACTTCAGCTCCGACGGATTGTAGGCACATGGTTTCAGGTACTATTTCAC 489
| ||| | ||| | || | ||| | ||||||||||||| || |||||||||
Sbjct 3471 TCTTAA----CCCTT------CCACTGCTTGCAAGCACATGGTTTCATGTTCTATTTCAC 3520
Query 490 TCCCCGCCAGGGGTACTTTTCACCTTTCCCTCACGGTACTTGTCCGCTATCGGTCACCAA 549
||||| ||||||| ||||||||| ||||||| ||||||| | ||||||||||||| |
Sbjct 3521 TCCCCAACAGGGGTTCTTTTCACCGTTCCCTCGCGGTACTATTTCGCTATCGGTCACTCA 3580
Query 550 GGAGTATTTAGGCTTAACGGGTGGTCCCGCCAGATTCACACGAAATTTCA 599
||| ||||||| |||| |||||||| |||||||| ||| ||||||
Sbjct 3581 GGAATATTTAGCCTTACGAGGTGGTCCTCGCAGATTCATACGGGATTTCA 3630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1817525442048
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |