Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chlamydomonas_20asymmetrica_20[genbank_20GCA_5F001662385.1_202016- 04-26] 4,102 sequences; 141,916,335 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq2624 188 2e-45 >seq2624 Length=3676 Score = 188 bits (208), Expect = 2e-45 Identities = 157/191 (82%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 208 CACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAG 267 |||||||||||| | ||||| ||| || |||| ||||||| | | ||| ||||| Sbjct 2853 CACAGCTTCGGCAGGCTACTTAGTCCCGGC--CATTGTCGGCGCAAGAACGCTTTACCAG 2910 Query 268 TGAGCTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTAC 327 ||||||||||||||||||||||||| | |||||||| |||| ||| |||||||||| || Sbjct 2911 TGAGCTATTACGCACTCTTTCAAGGGTAGCTGCTTCTAAGCGAACTTCCTGGTTGTTTAA 2970 Query 328 GCAACTCCACATCCTTTCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGC 387 ||| |||||||||| ||||| || ||| |||||||||||||||| |||||||||| Sbjct 2971 GCATTCTCACATCCTTTTCCACTTAGCAGCCATTTAGGGGCCTTAGCTGGTGATCTGGGC 3030 Query 388 TGTTTCCCTCT 398 ||||||||||| Sbjct 3031 TGTTTCCCTCT 3041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177551694848